RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 IFT80Q9P2H3 777 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ATP6V1HQ9UI12 483 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PHF11Q9UIL8 331 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 LEF1Q9UJU2 399 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PSME2Q9UL46 239 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DAPP1Q9UN19 280 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SATB2Q9UPW6 733 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 EXO1Q9UQ84 846 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ENTPD4Q9Y227 616 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 TMEM184BQ9Y519 407 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 PCDHGA1Q9Y5H4 931 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 SNX8Q9Y5X2 465 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ZNF780BQ9Y6R6 833 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 HEATR5BQ9P2D3 2071 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 DMDP11532 3685 aa3.81□□□□□ -1.8
TMEM39A-204ENST00000468545 ASCC3Q8N3C0 2202 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PRSS51A0A1B0GVH4 220 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A1B0GX78 115 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 A0A1W2PNU3 283 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ASPDHA6ND91 283 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 B4E171 279 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 H0YIG0 161 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 H3BMH7 237 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CYR61O00622 381 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CLDN4O14493 209 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RFXANKO14593 260 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC22A2O15244 555 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 FGF17O60258 216 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 OR10H2O60403 315 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CTNSO60931 367 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 NME6O75414 186 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 STK17BO94768 372 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ZFPL1O95159 310 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GPR75O95800 540 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ABHD16AO95870 558 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GRPP07492 148 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 HEXBP07686 556 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 FHP07954 510 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 KRT16P08779 473 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 HBQ1P09105 142 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CDK4P11802 303 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CEACAM1P13688 526 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PORP16435 677 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 DDX5P17844 614 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TCN1P20061 433 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ITGAXP20702 1163 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MAOAP21397 527 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PTPN4P29074 926 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RBMS1P29558 406 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 NTSP30990 170 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MPIP34949 423 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CHI3L1P36222 383 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PGM1P36871 562 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TSPAN7P41732 249 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CDKN2CP42773 168 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TSFMP43897 325 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GSTM5P46439 218 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RASSF2P50749 326 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ANXA11P50995 505 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ARFIP1P53367 373 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 EMP2P54851 167 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 WNT3P56703 355 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 NCALDP61601 193 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 IRX1P78414 480 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TNFRSF17Q02223 184 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 FOLH1Q04609 750 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 ABHD18Q0P651 414 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 IL11RAQ14626 422 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 LTB4RQ15722 352 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MPEG1Q2M385 716 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GTDC1Q4AE62 458 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 NKAIN1Q4KMZ8 207 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 FAM69BQ5VUD6 431 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 OR52E8Q6IFG1 317 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RHBDD2Q6NTF9 364 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 NIPAL1Q6NVV3 410 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 SLC48A1Q6P1K1 146 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PRMT9Q6P2P2 845 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CYB5D1Q6P9G0 228 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 CRIP3Q6Q6R5 217 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 C16orf89Q6UX73 402 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 IKBIPQ70UQ0 350 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 MRGPREQ86SM8 312 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 DHDDSQ86SQ9 333 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GLRX5Q86SX6 157 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 IFNEQ86WN2 208 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 TMPRSS12Q86WS5 348 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 DEFB107AQ8IZN7 70 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RNF148Q8N7C7 305 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 BMPERQ8N8U9 685 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 Q8NA96 180 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 RBM15BQ8NDT2 890 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PSD4Q8NDX1 1056 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 OR5AK3PQ8NH89 298 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 POC1BQ8TC44 478 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 PNPT1Q8TCS8 783 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 OR5P2Q8WZ92 322 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 STARD8Q92502 1023 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 GTF2H4Q92759 462 aa3.8□□□□□ -1.8
TMEM39A-204ENST00000468545 KAT2AQ92830 837 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms