RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 NANOS1Q8WY41 292 aaKnown RBP11.73□□□□□ -0.53
PTPN7-207ENST00000468385 GFM2Q969S9 779 aaKnown RBP11.73□□□□□ -0.53
PTPN7-207ENST00000468385 PLPPR2Q96GM1 343 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 STMN4Q9H169 189 aaPredicted RBP11.73□□□□□ -0.53
PTPN7-207ENST00000468385 ACSS3Q9H6R3 686 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 PTGES2Q9H7Z7 377 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 SLC35C2Q9NQQ7 365 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 SDHAF3Q9NRP4 125 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 ABCG2Q9UNQ0 655 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 AP4B1Q9Y6B7 739 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
PTPN7-207ENST00000468385 A8MT66 165 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 SHISA8B8ZZ34 492 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 MANBAO00462 879 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 HS3ST1O14792 307 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 FCGR2AP12318 317 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 IL11P20809 199 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 HSD17B3P37058 310 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 CSTF3Q12996 717 aaKnown RBP11.72□□□□□ -0.53
PTPN7-207ENST00000468385 HEPACAMQ14CZ8 416 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 SGCBQ16585 318 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 PRSS53Q2L4Q9 553 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 TMEM44Q2T9K0 475 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 TSNAXIP1Q2TAA8 658 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 GLYR1Q49A26 553 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-207ENST00000468385 CYP27C1Q4G0S4 372 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 SH2D4BQ5SQS7 431 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 MARCH3Q86UD3 253 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 CDYL2Q8N8U2 506 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 APIPQ96GX9 242 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 MRPL57Q9BQC6 102 aaKnown RBP11.72□□□□□ -0.53
PTPN7-207ENST00000468385 ACPTQ9BZG2 426 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 MRPL46Q9H2W6 279 aaKnown RBP11.72□□□□□ -0.53
PTPN7-207ENST00000468385 GIMAP4Q9NUV9 329 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 FAM120CQ9NX05 1096 aaKnown RBP11.72□□□□□ -0.53
PTPN7-207ENST00000468385 NINJ2Q9NZG7 142 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 CLEC4AQ9UMR7 237 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 EMC9Q9Y3B6 208 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 USF3Q68DE3 2245 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 CHD3Q12873 2000 aaKnown RBP11.72□□□□□ -0.53
PTPN7-207ENST00000468385 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
PTPN7-207ENST00000468385 ROS1P08922 2347 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 A0A087WV62 115 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 IGLV3-32A0A0A0MS00 114 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 GNG14A0A1W2PPG7 69 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 ESYT3A0FGR9 886 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 MYO1GB0I1T2 1018 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 COQ9O75208 318 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 PSMG1O95456 288 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 COL6A2P12110 1019 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 TIA1P31483 386 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 MPIP34949 423 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 PHBP35232 272 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 CLCQ05315 142 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 DMTNQ08495 405 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 DECR1Q16698 335 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 HEPHL1Q6MZM0 1159 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 APOOLQ6UXV4 268 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 WFDC8Q8IUA0 241 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 AKAP1Q92667 903 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 C11orf24Q96F05 449 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 GMPPAQ96IJ6 420 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 ADGRG7Q96K78 797 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 FUT8Q9BYC5 575 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 ACTR6Q9GZN1 396 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 ZDHHC18Q9NUE0 388 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 C19orf53Q9UNZ5 99 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-207ENST00000468385 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.53
PTPN7-207ENST00000468385 ATRQ13535 2644 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 UPK1AO00322 258 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 EIF1AYO14602 144 aaKnown RBP11.7□□□□□ -0.54
PTPN7-207ENST00000468385 IL33O95760 270 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 KRT6AP02538 564 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 KRT6BP04259 564 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 KRT6CP48668 564 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 HTR6P50406 440 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
PTPN7-207ENST00000468385 RASA2Q15283 850 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 UNC50Q53HI1 259 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 SPIN4Q56A73 249 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 LGSNQ5TDP6 509 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 PPP4R4Q6NUP7 873 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 GALNT18Q6P9A2 607 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 TMEM107Q6UX40 140 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 OR10D3Q8NH80 312 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 LILRB1Q8NHL6 650 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-207ENST00000468385 BBS4Q96RK4 519 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 EBPLQ9BY08 206 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 PRRG4Q9BZD6 226 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 SHCBP1LQ9BZQ2 653 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 OR10A4Q9H209 315 aa11.7□□□□□ -0.54
PTPN7-207ENST00000468385 DMGDHQ9UI17 866 aaKnown RBP11.7□□□□□ -0.54
PTPN7-207ENST00000468385 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms