RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 TNPO3Q9Y5L0 923 aaKnown RBP16.66■□□□□ 0.26
LINC00888-201ENST00000468380 HMX2A2RU54 273 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 EIF1AYO14602 144 aaKnown RBP16.65■□□□□ 0.26
LINC00888-201ENST00000468380 NTN1O95631 604 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 PLGP00747 810 aaPredicted RBP16.65■□□□□ 0.26
LINC00888-201ENST00000468380 CD3EP07766 207 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 IFT88Q13099 833 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 LGSNQ5TDP6 509 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 DNAJC14Q6Y2X3 702 aaPredicted RBP16.65■□□□□ 0.26
LINC00888-201ENST00000468380 CREG2Q8IUH2 290 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 KBTBD8Q8NFY9 601 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 OR7G2Q8NG99 324 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 OR10D3Q8NH80 312 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 ERP27Q96DN0 273 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 C11orf24Q96F05 449 aaPredicted RBP16.65■□□□□ 0.26
LINC00888-201ENST00000468380 ADGRG7Q96K78 797 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 NPAS1Q99742 590 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 TACO1Q9BSH4 297 aaKnown RBP16.65■□□□□ 0.26
LINC00888-201ENST00000468380 TRAF4Q9BUZ4 470 aaPredicted RBP16.65■□□□□ 0.26
LINC00888-201ENST00000468380 PTGES2Q9H7Z7 377 aa16.65■□□□□ 0.26
LINC00888-201ENST00000468380 FREM1Q5H8C1 2179 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 UQCRHLA0A096LP55 91 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 A0A1W2PP18 115 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 HAX1O00165 279 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 PPP6CO00743 305 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 GMFGO60234 142 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 GCM2O75603 506 aaPredicted RBP16.64■□□□□ 0.25
LINC00888-201ENST00000468380 PDYNP01213 254 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 TAB1Q15750 504 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 TMEM249Q2WGJ8 235 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 METTL2BQ6P1Q9 378 aaKnown RBP16.64■□□□□ 0.25
LINC00888-201ENST00000468380 SEZ6L2Q6UXD5 910 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 RPS27LQ71UM5 84 aaKnown RBP16.64■□□□□ 0.25
LINC00888-201ENST00000468380 C1orf52Q8N6N3 182 aaKnown RBP16.64■□□□□ 0.25
LINC00888-201ENST00000468380 PTGR2Q8N8N7 351 aaPredicted RBP16.64■□□□□ 0.25
LINC00888-201ENST00000468380 OR10H5Q8NGA6 315 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 MTBPQ96DY7 904 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 PHF21BQ96EK2 531 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 FAIM2Q9BWQ8 316 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 BEX2Q9BXY8 128 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 C12orf49Q9H741 205 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 PFDN4Q9NQP4 134 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 SDHAF3Q9NRP4 125 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 OR10H1Q9Y4A9 318 aa16.64■□□□□ 0.25
LINC00888-201ENST00000468380 CCDC189A1A4V9 331 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 DPRXA6NFQ7 191 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 SSX4O60224 188 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 PLOD3O60568 738 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 KLHL2O95198 593 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 PTNP21246 168 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 TRA2BP62995 288 aaKnown RBP16.63■□□□□ 0.25
LINC00888-201ENST00000468380 PSPHP78330 225 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 MRPS22P82650 360 aaKnown RBP16.63■□□□□ 0.25
LINC00888-201ENST00000468380 ERCC6LQ2NKX8 1250 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 FIGNL1Q6PIW4 674 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 APOOLQ6UXV4 268 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.63■□□□□ 0.25
LINC00888-201ENST00000468380 PLD6Q8N2A8 252 aaKnown RBP16.63■□□□□ 0.25
LINC00888-201ENST00000468380 ZNF619Q8N2I2 560 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 STEAP2Q8NFT2 490 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 OR4F6Q8NGB9 312 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 EXOSC8Q96B26 276 aaKnown RBP16.63■□□□□ 0.25
LINC00888-201ENST00000468380 TNFRSF13CQ96RJ3 184 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 KCNK17Q96T54 332 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 HBEGFQ99075 208 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 RHNO1Q9BSD3 238 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 TRIM2Q9C040 744 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 ELOVL6Q9H5J4 265 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 FBXO34Q9NWN3 711 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 PCTPQ9UKL6 214 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 ABCG2Q9UNQ0 655 aa16.63■□□□□ 0.25
LINC00888-201ENST00000468380 IGLV3-32A0A0A0MS00 114 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 FAM234BA2RU67 622 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 EIF3HO15372 352 aaKnown RBP eCLIP16.62■□□□□ 0.25
LINC00888-201ENST00000468380 CXCL13O43927 109 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 RAMP1O60894 148 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 PRSS53Q2L4Q9 553 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 CYP27C1Q4G0S4 372 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 MROH9Q5TGP6 573 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 GALNT10Q86SR1 603 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 GABRG1Q8N1C3 465 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 ARIH2OSQ8N7S6 290 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 FBF1Q8TES7 1133 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 HS6ST2Q96MM7 605 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 ESRP2Q9H6T0 727 aaKnown RBP16.62■□□□□ 0.25
LINC00888-201ENST00000468380 FANCFQ9NPI8 374 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 TMEM160Q9NX00 188 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 FAM120CQ9NX05 1096 aaKnown RBP16.62■□□□□ 0.25
LINC00888-201ENST00000468380 TAS2R9Q9NYW1 312 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 B3GALT5Q9Y2C3 310 aa16.62■□□□□ 0.25
LINC00888-201ENST00000468380 ADAMDEC1O15204 470 aa16.61■□□□□ 0.25
LINC00888-201ENST00000468380 ESRRBO95718 433 aa16.61■□□□□ 0.25
LINC00888-201ENST00000468380 IL3P08700 152 aa16.61■□□□□ 0.25
LINC00888-201ENST00000468380 GSTA2P09210 222 aa16.61■□□□□ 0.25
LINC00888-201ENST00000468380 TCP1P17987 556 aaKnown RBP16.61■□□□□ 0.25
LINC00888-201ENST00000468380 ADH6P28332 368 aa16.61■□□□□ 0.25
LINC00888-201ENST00000468380 AGTR1P30556 359 aa16.61■□□□□ 0.25
LINC00888-201ENST00000468380 BSPH1Q075Z2 132 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms