RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RPP30P78346 268 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SPEM2Q0P670 501 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 NPTX1Q15818 432 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF124Q15973 351 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PRAMEF8Q5VWM4 474 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PRAMEF7Q5VXH5 474 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZAR1Q86SH2 424 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 RBM45Q8IUH3 476 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ALDH16A1Q8IZ83 802 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 GALNT4Q8N4A0 578 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 OR4C15Q8NGM1 316 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PIK3R3Q92569 461 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 RIT1Q92963 219 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 POP5Q969H6 163 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 EME1Q96AY2 570 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PIP5K1AQ99755 562 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CTRCQ99895 268 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 VN1R1Q9GZP7 353 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SAP130Q9H0E3 1048 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TPK1Q9H3S4 243 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PIGUQ9H490 435 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 NEK6Q9HC98 313 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 THSD1Q9NS62 852 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TRPC4Q9UBN4 977 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 RAB23Q9ULC3 237 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PCSK5Q92824 1860 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 GXYLT2A0PJZ3 443 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 VSTM2BA6NLU5 285 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SULT1B1O43704 296 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SLC28A2O43868 658 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TPST2O60704 377 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 DDAH2O95865 285 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 IGKV3-11P04433 115 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 FABP3P05413 133 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 RPS4Y1P22090 263 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 IL32P24001 234 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ETV1P50549 477 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SKP1P63208 163 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PPP2R2BQ00005 443 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CCNJQ5T5M9 372 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CDCP2Q5VXM1 449 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 RAB12Q6IQ22 244 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF704Q6ZNC4 412 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PATL1Q86TB9 770 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 LSRQ86X29 649 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 GPR135Q8IZ08 494 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 OR4N2Q8NGD1 307 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF721Q8TF20 911 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SDF2Q99470 211 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 BTBD2Q9BX70 525 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ADPRHL2Q9NX46 363 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TMEFF2Q9UIK5 374 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CDV3Q9UKY7 258 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 GPR55Q9Y2T6 319 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF451Q9Y4E5 1061 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 E9PQ18 207 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 EI24O14681 340 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SCRG1O75711 98 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 NKX2-2O95096 273 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ALPLP05186 524 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CT45A8P0DMV1 189 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CT45A9P0DMV2 189 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 FBLP22087 321 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TXNL4AP83876 142 aaKnown RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 INSM1Q01101 510 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 MC2RQ01718 297 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TRA2AQ13595 282 aaKnown RBP eCLIP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 CT45A2Q5DJT8 189 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 C6orf52Q5T4I8 152 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PHF19Q5T6S3 580 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 TMEM154Q6P9G4 183 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF517Q6ZMY9 492 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 GALNT12Q8IXK2 581 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 HS6ST2Q96MM7 605 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 STACQ99469 402 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 FUZQ9BT04 418 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF350Q9GZX5 532 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ADAP2Q9NPF8 381 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 SEMA4GQ9NTN9 838 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 COQ3Q9NZJ6 369 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 FTSJ1Q9UET6 329 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 NDOR1Q9UHB4 597 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 KCND3Q9UK17 655 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 ERVK-19Q9WJR5 959 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 RPH3AQ9Y2J0 694 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-208ENST00000468300 MMACHCQ9Y4U1 282 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 PCDHGA3Q9Y5H0 932 aa7.67□□□□□ -1.18
BRCA1-208ENST00000468300 EFCAB7A8K855 629 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 CLDN4O14493 209 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 DENRO43583 198 aaKnown RBP7.66□□□□□ -1.18
BRCA1-208ENST00000468300 PABPC4LP0CB38 370 aaKnown RBP7.66□□□□□ -1.18
BRCA1-208ENST00000468300 NR2F1P10589 423 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 UQCRBP14927 111 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 ETS2P15036 469 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 PRKACGP22612 351 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 CCKBRP32239 447 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 GPR143P51810 404 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 SLC37A1P57057 533 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 STX4Q12846 297 aa7.66□□□□□ -1.18
BRCA1-208ENST00000468300 MAPK14Q16539 360 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms