RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 B3GAT3O94766 335 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 IGF1P05019 195 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 BCKDHAP12694 445 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 XRCC1P18887 633 aaPredicted RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 CEBPDP49716 269 aaPredicted RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 MAP2K1Q02750 393 aaPredicted RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 MESDQ14696 234 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 FASTKD3Q14CZ7 662 aaKnown RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 RAB35Q15286 201 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 CHI3L2Q15782 390 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 UBE2V2Q15819 145 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 MS4A18Q3C1V0 323 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 SYT10Q6XYQ8 523 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 ZNF497Q6ZNH5 498 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 Q6ZPB1 254 aaPredicted RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 LANCL3Q6ZV70 420 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 TAS2R42Q7RTR8 314 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 EFL1Q7Z2Z2 1120 aaKnown RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 LRRC43Q8N309 656 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 CLDN19Q8N6F1 224 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 ZNF491Q8N8L2 437 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 AQP11Q8NBQ7 271 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 OR8J1Q8NGP2 316 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 SSC4DQ8WTU2 575 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 NT5C3BQ969T7 300 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 C11orf24Q96F05 449 aaPredicted RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 LINC00479Q96M42 142 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 AGAP4Q96P64 663 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 RIT2Q99578 217 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 HSD17B14Q9BPX1 270 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 MCRIP2Q9BUT9 160 aaKnown RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 NFKBIZQ9BYH8 718 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 FN3KRPQ9HA64 309 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 ESM1Q9NQ30 184 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 HYPKQ9NX55 129 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 BARHL2Q9NY43 387 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 UTP6Q9NYH9 597 aaKnown RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 MRPL39Q9NYK5 338 aaKnown RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 THAP10Q9P2Z0 257 aaPredicted RBP3.4□□□□□ -1.87
SMC4-208ENST00000467468 GNG12Q9UBI6 72 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 CRLS1Q9UJA2 301 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 ANAPC7Q9UJX3 599 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 FBXO7Q9Y3I1 522 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 MMP24Q9Y5R2 645 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 PRSS21Q9Y6M0 314 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 GRIN2DO15399 1336 aa3.4□□□□□ -1.87
SMC4-208ENST00000467468 TRAV26-1A0A087WT03 109 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 TRBV7-9A0A0J9YWB2 115 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 A0A0U1RQS6 177 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 METTL21EPA6NDL7 271 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 FAM74A7A6NL05 159 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 PRRG1O14668 218 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 STX7O15400 261 aaKnown RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 ZNF208O43345 1280 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 PPIHO43447 177 aaKnown RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 TPST2O60704 377 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 SORBS2O94875 1100 aaKnown RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 NUDT14O95848 222 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 JCHAINP01591 159 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 PGCP20142 388 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 PPP2R1BP30154 601 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 GDI1P31150 447 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 GRIA1P42261 906 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 BRCC3P46736 316 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 POU3F4P49335 361 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 RPS6P62753 249 aaKnown RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 NTHL1P78549 312 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 EWSR1Q01844 656 aaKnown RBP eCLIP3.39□□□□□ -1.87
SMC4-208ENST00000467468 ZNF33BQ06732 778 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 CCL14Q16627 93 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 FAM74A3Q4VXF1 159 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 APOOLQ6UXV4 268 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 HSD11B1LQ7Z5J1 315 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 CEACAM19Q7Z692 300 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 KIAA1328Q86T90 577 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 MYPOPQ86VE0 399 aaPredicted RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 VSTM4Q8IW00 320 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 UBQLNLQ8IYU4 475 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 LRRC75A-AS1Q8N1F1 130 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 ZNF614Q8N883 585 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 BEST4Q8NFU0 473 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 FNDC8Q8TC99 324 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 PIGCQ92535 297 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 TAF15Q92804 592 aaKnown RBP eCLIP3.39□□□□□ -1.877e-26■■■■□ 25.9
SMC4-208ENST00000467468 C18orf25Q96B23 403 aaPredicted RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 TADA1Q96BN2 335 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 TPD52L3Q96J77 140 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 ZNF599Q96NL3 588 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 AMDHD1Q96NU7 426 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 TGM7Q96PF1 710 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 NPAS2Q99743 824 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 TMEM121Q9BTD3 319 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 TMEM43Q9BTV4 400 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 GON7Q9BXV9 100 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 OCR1Q9BZK8 76 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 MAGT1Q9H0U3 335 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 ELL3Q9HB65 397 aaPredicted RBP3.39□□□□□ -1.87
SMC4-208ENST00000467468 ADGRL4Q9HBW9 690 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 UFSP2Q9NUQ7 469 aa3.39□□□□□ -1.87
SMC4-208ENST00000467468 SMOXQ9NWM0 555 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms