RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SPDL1Q96EA4 605 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 CHMP6Q96FZ7 201 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 ITCHQ96J02 903 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 CCDC167Q9P0B6 97 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 C15orf41Q9Y2V0 281 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 ZNF407Q9C0G0 2248 aa18.57■□□□□ 0.56
SKA3-205ENST00000465471 CLEC18AA5D8T8 446 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 DUXAA6NLW8 204 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 B4DXG7 233 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 UTS2O95399 124 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 GSNP06396 782 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 CELA3AP09093 270 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 ELOAQ14241 798 aaKnown RBP18.56■□□□□ 0.56
SKA3-205ENST00000465471 GRAMD1BQ3KR37 738 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 AGKQ53H12 422 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 DCST2Q5T1A1 773 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 CCNJQ5T5M9 372 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 CLEC18BQ6UXF7 455 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 GALNT10Q86SR1 603 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 WDSUB1Q8N9V3 476 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 CLEC18CQ8NCF0 446 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 ZFP90Q8TF47 636 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 G6PC3Q9BUM1 346 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 OR51I1Q9H343 314 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 B4GALT7Q9UBV7 327 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 ZNF835Q9Y2P0 537 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 PCDHGB3Q9Y5G1 929 aa18.56■□□□□ 0.56
SKA3-205ENST00000465471 A0A1B0GVC2 190 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 NR5A2O00482 541 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 CHI3L1P36222 383 aaPredicted RBP18.55■□□□□ 0.56
SKA3-205ENST00000465471 RFX3P48380 749 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 MASP1P48740 699 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 MVDP53602 400 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 TXNL4AP83876 142 aaKnown RBP18.55■□□□□ 0.56
SKA3-205ENST00000465471 HSF1Q00613 529 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 LRIF1Q5T3J3 769 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 AP1ARQ63HQ0 302 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 HEPHL1Q6MZM0 1159 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 SLC2A7Q6PXP3 512 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 ANGPTL8Q6UXH0 198 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 APOOLQ6UXV4 268 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 DNAJC14Q6Y2X3 702 aaPredicted RBP18.55■□□□□ 0.56
SKA3-205ENST00000465471 ZNF621Q6ZSS3 439 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 OR1J4Q8NGS1 313 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 OR4C3Q8NH37 302 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 JSRP1Q96MG2 331 aaPredicted RBP18.55■□□□□ 0.56
SKA3-205ENST00000465471 GNRHR2Q96P88 292 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 RTN4RQ9BZR6 473 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 PAIP1Q9H074 479 aaKnown RBP18.55■□□□□ 0.56
SKA3-205ENST00000465471 DEFB127Q9H1M4 99 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 ACKR4Q9NPB9 350 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 LIPGQ9Y5X9 500 aa18.55■□□□□ 0.56
SKA3-205ENST00000465471 DNAJC13O75165 2243 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 C2orf72A6NCS6 295 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 ALG1L2C9J202 215 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 GNB5O14775 395 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 AK1P00568 194 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 HPNP05981 417 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 GUSBP08236 651 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 STSP08842 583 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 TBXA2RP21731 343 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 MAGEA8P43361 318 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 KHKP50053 298 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 KCNC4Q03721 635 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 FUT5Q11128 374 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 EIF2S3LQ2VIR3 472 aaKnown RBP18.54■□□□□ 0.56
SKA3-205ENST00000465471 GTDC1Q4AE62 458 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 Q6ZPB1 254 aaPredicted RBP18.54■□□□□ 0.56
SKA3-205ENST00000465471 TRILQ7L0X0 811 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 RNF130Q86XS8 419 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 SDF2Q99470 211 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 FAM53CQ9NYF3 392 aa18.54■□□□□ 0.56
SKA3-205ENST00000465471 USP9XQ93008 2570 aaPredicted RBP18.53■□□□□ 0.56
SKA3-205ENST00000465471 A0A096LPI6 279 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 IGLV3-32A0A0A0MS00 114 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 A0A1W2PP18 115 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 C17orf51A8MQB3 221 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 NPIPB9F8W1W9 429 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 HMGN4O00479 90 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 OXSR1O95747 527 aaPredicted RBP18.53■□□□□ 0.56
SKA3-205ENST00000465471 AGR2O95994 175 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 LSP1P33241 339 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 GYS2P54840 703 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 CASP9P55211 416 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 SRSF1Q07955 248 aaKnown RBP eCLIP18.53■□□□□ 0.561e-8■■■■□ 26.4
SKA3-205ENST00000465471 SLC10A1Q14973 349 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.53■□□□□ 0.56
SKA3-205ENST00000465471 ARHGAP11BQ3KRB8 267 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 PAGE3Q5JUK9 113 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 C6orf10Q5SRN2 563 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 TNFAIP8L2Q6P589 184 aaPredicted RBP18.53■□□□□ 0.56
SKA3-205ENST00000465471 PLCZ1Q86YW0 608 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 FADS6Q8N9I5 356 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 TSPEARQ8WU66 669 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 UBQLN4Q9NRR5 601 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 MRGBPQ9NV56 204 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 PCDHB14Q9Y5E9 798 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 GMEB1Q9Y692 573 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 FREM3P0C091 2139 aa18.53■□□□□ 0.56
SKA3-205ENST00000465471 GTF3C1Q12789 2109 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms