RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 POP4O95707 220 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 AGR2O95994 175 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 B3GALT4O96024 378 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 MT-ND5P03915 603 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 RPN2P04844 631 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 BCHEP06276 602 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 IL3P08700 152 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 CTSHP09668 335 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 GIPP09681 153 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 HNRNPCL4P0DMR1 293 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 NR2F1P10589 423 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 CPN1P15169 458 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF8P17098 575 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TYRP1P17643 537 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TNFRSF1BP20333 461 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 DDCP20711 480 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 RORAP35398 523 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 FAUP35544 74 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 PREPP48147 710 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SPINT3P49223 89 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 MMP15P51511 669 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TPMTP51580 245 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ARFIP1P53367 373 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 MANFP55145 182 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TAS2R50P59544 299 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 EFNB1P98172 346 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 FLI1Q01543 452 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 DHODHQ02127 395 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ST3GAL3Q11203 375 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 EXOSC2Q13868 293 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 FGFBP1Q14512 234 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 MAPK14Q16539 360 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 MPPE1Q53F39 396 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ELFN2Q5R3F8 820 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF648Q5T619 568 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 IDNKQ5T6J7 187 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 RAET1GQ6H3X3 334 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 PODNL1Q6PEZ8 512 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TMEM65Q6PI78 240 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ZNF322Q6U7Q0 402 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 CRTC1Q6UUV9 634 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 WASH2PQ6VEQ5 465 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 C3P1Q6ZMU1 363 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 HSD17B13Q7Z5P4 300 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC9B2Q86UD5 537 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ADGRG2Q8IZP9 1017 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 UBE2J2Q8N2K1 259 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC44A3Q8N4M1 653 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TBC1D19Q8N5T2 526 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TRAM1L1Q8N609 369 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ACBD7Q8N6N7 88 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 KLHDC9Q8NEP7 349 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 GPR156Q8NFN8 814 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 OR4K5Q8NGD3 323 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 OR4K1Q8NGD4 311 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SUN3Q8TAQ9 357 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC2A12Q8TD20 617 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SFXN5Q8TD22 340 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 HAVCR2Q8TDQ0 301 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC38A5Q8WUX1 472 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 RGMAQ96B86 450 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 EID2BQ96D98 161 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TRMT61AQ96FX7 289 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TRMT2BQ96GJ1 504 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 CCDC120Q96HB5 630 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TMEM19Q96HH6 336 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SLC35G5Q96KT7 338 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 COQ10AQ96MF6 247 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 SECISBP2Q96T21 854 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 FUZQ9BT04 418 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 DPCDQ9BVM2 203 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 FAIM2Q9BWQ8 316 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 PDGFDQ9GZP0 370 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 OR51B5Q9H339 312 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 LDAHQ9H6V9 325 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ELAC1Q9H777 363 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 C7orf69Q9H7B7 122 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 TBC1D17Q9HA65 648 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 IMP3Q9NV31 184 aaKnown RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 NUDT15Q9NV35 164 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 HCN3Q9P1Z3 774 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 FBXO9Q9UK97 447 aaPredicted RBP6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 POMT2Q9UKY4 750 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 MAFFQ9ULX9 164 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
CLSTN1-204ENST00000464286 ARPC4-TTLL3A0A0A6YYG9 625 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 TRAV1-2A0A0B4J238 106 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 RPS10-NUDT3A0A1W2PQS6 291 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 UBE2QL1A1L167 161 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 SNRPGP15A8MWD9 76 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 ATP6V1G2-DDX39BF2Z307 99 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 L7N2F9 121 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 M0R129 80 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 GTPBP1O00178 669 aaKnown RBP6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 WWP2O00308 870 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 EEF1E1O43324 174 aaKnown RBP6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 COCHO43405 550 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 RNF13O43567 381 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 RP2O75695 350 aa6.74□□□□□ -1.33
CLSTN1-204ENST00000464286 B3GALNT1O75752 331 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms