RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ADORA3P0DMS8 318 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 CCL4P13236 92 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 NR4A1P22736 598 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ATP5A1P25705 553 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 C21orf33P30042 268 aaPredicted RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 IDUAP35475 653 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 LIPAP38571 399 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ETV5P41161 510 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 UGT2B15P54855 530 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 GFERP55789 205 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 VBP1P61758 197 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 RPS26P62854 115 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 TGM3Q08188 693 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 TP53BP2Q13625 1128 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 GANABQ14697 944 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 RPS26P11Q5JNZ5 115 aaPredicted RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SNAP47Q5SQN1 464 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SLC25A30Q5SVS4 291 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 TUBA3EQ6PEY2 450 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 USP43Q70EL4 1123 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF554Q86TJ5 538 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ADCK1Q86TW2 530 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 CARFQ8N187 725 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 MFSD4AQ8N468 514 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 STX19Q8N4C7 294 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 BMPERQ8N8U9 685 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 AMER3Q8N944 861 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ACOT4Q8N9L9 421 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF248Q8NDW4 579 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 OR4E2Q8NGC2 313 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SUN3Q8TAQ9 357 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF675Q8TD23 568 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 UTP15Q8TED0 518 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 KLHL6Q8WZ60 621 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 ZHX1-C8orf76Q96EF9 292 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 TGM7Q96PF1 710 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 BBS4Q96RK4 519 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 CD180Q99467 661 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 NRTNQ99748 197 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 C17orf62Q9BQA9 187 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 RSPO3Q9BXY4 272 aaPredicted RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 NXF2Q9GZY0 626 aaKnown RBP9.25□□□□□ -0.93
PTPRD-207ENST00000463477 OR51I1Q9H343 314 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SLC25A19Q9HC21 320 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 OCIAD1Q9NX40 245 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 OR6C2Q9NZP2 312 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 CES1P1Q9UKY3 287 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SLC9A8Q9Y2E8 581 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 PMF1-BGLAPU3KQ54 211 aa9.25□□□□□ -0.93
PTPRD-207ENST00000463477 TRBV4-1A0A0J9YWV2 114 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PRAMEF27A3QJZ7 478 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 OR6C74A6NCV1 312 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 C9orf172C9J069 976 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 KPNA4O00629 521 aaPredicted RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 HAT1O14929 419 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 AIREO43918 545 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 MAN1A2O60476 641 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 CNOT3O75175 753 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 SEMA7AO75326 666 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 LGI1O95970 557 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 OR12D1P0DN82 309 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PEBP1P30086 187 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 GPC1P35052 558 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 NCBP2P52298 156 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 STXBP1P61764 594 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 NCS1P62166 190 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 MC2RQ01718 297 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 ST3GAL4Q11206 333 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 SLAMF1Q13291 335 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 SLC48A1Q6P1K1 146 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PGBD2Q6P3X8 592 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PRSS42Q7Z5A4 293 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 ADCK2Q7Z695 626 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 OOSP2Q86WS3 158 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PLD3Q8IV08 490 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 CENPSQ8N2Z9 138 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 B3GNT7Q8NFL0 401 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 KBTBD8Q8NFY9 601 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 LCN9Q8WX39 176 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 RAB8BQ92930 207 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PRRC1Q96M27 445 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 PINK1Q9BXM7 581 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 MROQ9BYG7 248 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 DPH1Q9BZG8 443 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 DCSTAMPQ9H295 470 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 SRMSQ9H3Y6 488 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 ZNF768Q9H5H4 540 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 ZCCHC3Q9NUD5 404 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 MS4A12Q9NXJ0 267 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 GPR83Q9NYM4 423 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 CALML5Q9NZT1 146 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 CCDC59Q9P031 241 aaKnown RBP9.24□□□□□ -0.93
PTPRD-207ENST00000463477 NTMQ9P121 344 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 C5AR2Q9P296 337 aa9.24□□□□□ -0.93
PTPRD-207ENST00000463477 KLHL3Q9UH77 587 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms