RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ERI3O43414 337 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 B4GAT1O43505 415 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 KIF1CO43896 1103 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 PROP1O75360 226 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 CIB2O75838 187 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 PDE5AO76074 875 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 EPN2O95208 641 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 CER1O95813 267 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 IL3P08700 152 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 SLC35G6P0C7Q6 338 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 HPCAL1P37235 193 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 RPL3P39023 403 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 SSR2P43308 183 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 GSTM5P46439 218 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 MAPK12P53778 367 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 MTTPP55157 894 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 RAB8AP61006 207 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ARF3P61204 181 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TRA2BP62995 288 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TXNL4AP83876 142 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 PLIN5Q00G26 463 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 FOXM1Q08050 763 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TGM3Q08188 693 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 CAPRIN1Q14444 709 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 NR1D2Q14995 579 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TRMT5Q32P41 509 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 AMZ1Q400G9 498 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 AWAT1Q58HT5 328 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 CPTPQ5TA50 214 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 C6orf163Q5TEZ5 329 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 PRAMEF17Q5VTA0 474 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 NKAIN2Q5VXU1 208 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 OR4F3Q6IEY1 312 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 FRMPD2BQ6IN97 320 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 FAM71E1Q6IPT2 247 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TRIM40Q6P9F5 258 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 DLEU7Q6UYE1 221 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 FAM92BQ6ZTR7 304 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 MSANTD1Q6ZTZ1 278 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 IKBIPQ70UQ0 350 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 R3HCC1LQ7Z5L2 792 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 NET1Q7Z628 596 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 DHDDSQ86SQ9 333 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 HPS6Q86YV9 775 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 OR4N4Q8N0Y3 316 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 AMER3Q8N944 861 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 Q8N9G6 341 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 PNLDC1Q8NA58 520 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ATG16L2Q8NAA4 619 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 CAMKVQ8NCB2 501 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 OR2L5Q8NG80 312 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 OR6C4Q8NGE1 309 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 OR8J2Q8NGG1 315 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 GTF2H4Q92759 462 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 RERGQ96A58 199 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TM4SF18Q96CE8 201 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 COQ8BQ96D53 544 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ITCHQ96J02 903 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TGM7Q96PF1 710 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TEFMQ96QE5 360 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 MAP3K3Q99759 626 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ARPC5LQ9BPX5 153 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 C17orf62Q9BQA9 187 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 GPATCH1Q9BRR8 931 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TBCDQ9BTW9 1192 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 GTPBP2Q9BX10 602 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 RAB33BQ9H082 229 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ARRDC1-AS1Q9H2J1 176 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 REEP4Q9H6H4 257 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 RMND5AQ9H871 391 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 SPAG4Q9NPE6 437 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 LHX9Q9NQ69 397 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ADA2Q9NZK5 511 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 TMEM181Q9P2C4 612 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 SLC7A8Q9UHI5 535 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 ATP6V1HQ9UI12 483 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 GMEB2Q9UKD1 530 aa6.86□□□□□ -1.31
UBE4B-204ENST00000462658 EXO1Q9UQ84 846 aaKnown RBP6.86□□□□□ -1.31
UBE4B-204ENST00000462658 CACNA1AO00555 2505 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 RALGAPA1Q6GYQ0 2036 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 A0A0A6YYD5 115 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 PRSS51A0A1B0GVH4 220 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 CPED1A4D0V7 1026 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 TLCD2A6NGC4 264 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 A8MUI8 341 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 C4orf51C9J302 202 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 H7C1Q1 480 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 FXYD1O00168 92 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 P2RX6O15547 441 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 DUX1O43812 170 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SH3BP5O60239 455 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 GUCY1B2O75343 617 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 SORBS2O94875 1100 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 MT-CO3P00414 261 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 EIF2S1P05198 315 aaKnown RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 FAM58BPP0C7Q3 252 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 LAMP1P11279 417 aa6.85□□□□□ -1.31
UBE4B-204ENST00000462658 HIST1H1TP22492 207 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-204ENST00000462658 ME2P23368 584 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms