RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CIDECQ96AQ7 238 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 ERP27Q96DN0 273 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 JSRP1Q96MG2 331 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 RILPQ96NA2 401 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 AMDHD1Q96NU7 426 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 BTBD9Q96Q07 612 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 C1orf50Q9BV19 199 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 PFDN4Q9NQP4 134 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZNF629Q9UEG4 869 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 BCAP29Q9UHQ4 241 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 BAIAP2L1Q9UHR4 511 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 FOXD3Q9UJU5 478 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 C15orf41Q9Y2V0 281 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 WBP11Q9Y2W2 641 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC6A5Q9Y345 797 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 TMED5Q9Y3A6 229 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 RAP2CQ9Y3L5 183 aa7.21□□□□□ -1.26
CDC42BPA-210ENST00000462553 A0A087WV62 115 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 TUBAL3A6NHL2 446 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CD8B2A6NJW9 211 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CLCA1A8K7I4 914 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PLOD2O00469 737 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 TO15178 435 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 AKAP10O43572 662 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PEX11AO75192 247 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 HRGP04196 525 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 IFI6P09912 130 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CT45A8P0DMV1 189 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CT45A9P0DMV2 189 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 BMP7P18075 431 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 NTSP30990 170 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PTGDSP41222 190 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 MC3RP41968 323 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 NCBP2P52298 156 aaKnown RBP eCLIP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 AGFG1P52594 562 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 SLC18A1P54219 525 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CORO7P57737 925 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 DCAF7P61962 342 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 OCRLQ01968 901 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PTGR1Q14914 329 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ATP6AP1LQ52LC2 224 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 EIPR1Q53HC9 387 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CT45A2Q5DJT8 189 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 TBCELQ5QJ74 424 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 HHATQ5VTY9 493 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 TMEM107Q6UX40 140 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 Q71RC1 249 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ZNF551Q7Z340 670 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ADGRE4PQ86SQ3 457 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CXorf67Q86X51 503 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 SAMD14Q8IZD0 417 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 TAGAPQ8N103 731 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 C9orf106Q8NAJ2 232 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PPP1R14CQ8TAE6 165 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 LINC01560Q8TB33 94 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 SPPL2AQ8TCT8 520 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 MGARPQ8TDB4 240 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 RNF138Q8WVD3 245 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 DIO2Q92813 273 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 HOXB13Q92826 284 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 HGDQ93099 445 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 OMA1Q96E52 524 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ARSGQ96EG1 525 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 HSPBAP1Q96EW2 488 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 WDYHV1Q96HA8 205 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 LCORQ96JN0 433 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 C18orf12Q96KH6 178 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PPP3R2Q96LZ3 170 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 GNRHR2Q96P88 292 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 BBS4Q96RK4 519 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 UGT2B28Q9BY64 529 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ANGPTL4Q9BY76 406 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 STMN4Q9H169 189 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 REEP4Q9H6H4 257 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 FOLH1BQ9HBA9 442 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 MIEF1Q9NQG6 463 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 GIMAP4Q9NUV9 329 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PNPOQ9NVS9 261 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ASIC5Q9NY37 505 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 PRODH2Q9UF12 536 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ATP6V1HQ9UI12 483 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CAMK2AQ9UQM7 478 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 GPR55Q9Y2T6 319 aaPredicted RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 NPFFR2Q9Y5X5 522 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CR1P17927 2039 aa7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 CHD3Q12873 2000 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-210ENST00000462553 ABCA1O95477 2261 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 FRG2CA6NGY1 282 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 B4DXG7 233 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 EEF1E1-BLOC1S5C9J1V9 151 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 UPK1AO00322 258 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 SDHDO14521 159 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 SCAMP2O15127 329 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 ACOX3O15254 700 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 PDPK1O15530 556 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 SIAH2O43255 324 aa7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 EEF1E1O43324 174 aaKnown RBP7.19□□□□□ -1.26
CDC42BPA-210ENST00000462553 TSPAN2O60636 221 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms