RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 LMF2Q9BU23 707 aaKnown RBP8.17□□□□□ -1.1
DDX39B-216ENST00000462421 ACTRT3Q9BYD9 372 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 NUF2Q9BZD4 464 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 RMND5AQ9H871 391 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 ANKRA2Q9H9E1 313 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 UBQLN4Q9NRR5 601 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 FOXD3Q9UJU5 478 aaPredicted RBP8.17□□□□□ -1.1
DDX39B-216ENST00000462421 RPH3AQ9Y2J0 694 aaPredicted RBP8.17□□□□□ -1.1
DDX39B-216ENST00000462421 SLC6A5Q9Y345 797 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 SHANK1Q9Y566 2161 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 LRRK2Q5S007 2527 aa8.17□□□□□ -1.1
DDX39B-216ENST00000462421 A0A087WZY1 265 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 C2orf72A6NCS6 295 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 GJE1A6NN92 205 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 EEF1E1-BLOC1S5C9J1V9 151 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 HDAC3O15379 428 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 EEF1E1O43324 174 aaKnown RBP8.16□□□□□ -1.1
DDX39B-216ENST00000462421 GMFGO60234 142 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TSPAN2O60636 221 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 UTS2O95399 124 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 ANGPTL1O95841 491 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 RFPL3SP0C7P2 107 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 RNF224P0DH78 156 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 KITP10721 976 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 G6PDP11413 515 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 UQCRBP14927 111 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 BMP5P22003 454 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TACR1P25103 407 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 MSX1P28360 303 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 KHKP50053 298 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 OCRLQ01968 901 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 DUSP2Q05923 314 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 GAB1Q13480 694 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 PDE7AQ13946 482 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 GNA13Q14344 377 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 FGFBP1Q14512 234 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 LASP1Q14847 261 aaKnown RBP8.16□□□□□ -1.1
DDX39B-216ENST00000462421 PTGR1Q14914 329 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 KIAA0040Q15053 153 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 EIPR1Q53HC9 387 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 XKR7Q5GH72 579 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 OR5M10Q6IEU7 315 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TMEM200AQ86VY9 491 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 CCDC71Q8IV32 467 aaPredicted RBP8.16□□□□□ -1.1
DDX39B-216ENST00000462421 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 UBQLNLQ8IYU4 475 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 LILRB4Q8NHJ6 448 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDX39B-216ENST00000462421 SLC35G5Q96KT7 338 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 FCRL1Q96LA6 429 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TIMP4Q99727 224 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 YIPF4Q9BSR8 244 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 BTBD2Q9BX70 525 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 UGT2B28Q9BY64 529 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 OR2B2Q9GZK3 357 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 DSN1Q9H410 356 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TUBB1Q9H4B7 451 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 MANSC1Q9H8J5 431 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 CALHM2Q9HA72 323 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TIGARQ9NQ88 270 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 SPRR3Q9UBC9 169 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 TNFRSF10DQ9UBN6 386 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 CCL27Q9Y4X3 112 aa8.16□□□□□ -1.1
DDX39B-216ENST00000462421 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 RNF103-CHMP3A0A140T963 221 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 E9PBE3 544 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 H3BML4 177 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 POLR3GO15318 223 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ZNHIT1O43257 154 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 SEC14L5O43304 696 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 HCRTR2O43614 444 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 SYNGR4O95473 234 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CPSF4O95639 269 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 C6orf47O95873 294 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 EPPINO95925 133 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 TMIGD3P0DMS9 266 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 GLI4P10075 376 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 LAMP1P11279 417 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 IDO1P14902 403 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CREB1P16220 341 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 BMP7P18075 431 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 MATN1P21941 496 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ETV4P43268 484 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 KCNJ5P48544 419 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ASCL1P50553 236 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CCR4P51679 360 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 SLC18A1P54219 525 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CLDN8P56748 225 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 TXNL4AP83876 142 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 PSG6Q00889 435 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CRYZQ08257 329 aaKnown RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 BST1Q10588 318 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 CASP8Q14790 479 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 ACSF3Q4G176 576 aaPredicted RBP8.15□□□□□ -1.1
DDX39B-216ENST00000462421 FLYWCH1Q4VC44 716 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 NHSL2Q5HYW2 709 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 AGBL2Q5U5Z8 902 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 NSUN5P2Q63ZY6 315 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 HIST2H2BCQ6DN03 193 aa8.15□□□□□ -1.1
DDX39B-216ENST00000462421 GTF2IRD2BQ6EKJ0 949 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms