RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 SNX8Q9Y5X2 465 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
COPS3-204ENST00000462236 NOTCH1P46531 2555 aa4.4□□□□□ -1.7
COPS3-204ENST00000462236 LOC102723996A0A087X1L8 192 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 A0A1B0GX78 115 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 C1orf226A1L170 272 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 GSAPA4D1B5 854 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 OR2AG2A6NM03 316 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 OGG1O15527 345 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 KCNAB3O43448 404 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 TMCC2O75069 709 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 BMP10O95393 424 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 SERPINA7P05543 415 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 NGFRP08138 427 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 PIRTP0C851 137 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 TPBGLP0DKB5 382 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 T-ENOLP0DO92 83 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 ZNF12P17014 697 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 LMO1P25800 156 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 PEBP1P30086 187 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 CD86P42081 329 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 KLK7P49862 253 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 HTR6P50406 440 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 GPR143P51810 404 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 PMP22Q01453 160 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 SLC25A11Q02978 314 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 PRKAA1Q13131 559 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 XRCC4Q13426 336 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 DHX34Q14147 1143 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 IRF3Q14653 427 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 CEBPEQ15744 281 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 DEFB110Q30KQ9 67 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 BOLA3Q53S33 107 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 LDLRAP1Q5SW96 308 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 LRIF1Q5T3J3 769 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 CCDC183Q5T5S1 534 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 CES4AQ5XG92 561 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 NCBP2-AS2Q69YL0 99 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 H3F3CQ6NXT2 135 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 DCUN1D2Q6PH85 259 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 Q71RC1 249 aaPredicted RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 SAMD14Q8IZD0 417 aaPredicted RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 TAGAPQ8N103 731 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 ZNF114Q8NC26 417 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 MDS2Q8NDY4 140 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 WFDC11Q8NEX6 87 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 OR52E1Q8NGJ3 308 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 OR1J2Q8NGS2 313 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 AGAP11Q8TF27 550 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 LCN9Q8WX39 176 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.4□□□□□ -1.71
COPS3-204ENST00000462236 FAF2Q96CS3 445 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 ELMOD3Q96FG2 381 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 IMP4Q96G21 291 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 SCMH1Q96GD3 660 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 C18orf12Q96KH6 178 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 EGLN2Q96KS0 407 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 SLC7A5P2Q9GIP4 190 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 SRMSQ9H3Y6 488 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 SAMSN1Q9NSI8 373 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 TRMT1Q9NXH9 659 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 CTSFQ9UBX1 484 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 NXT1Q9UKK6 140 aaKnown RBP4.4□□□□□ -1.71
COPS3-204ENST00000462236 COLEC10Q9Y6Z7 277 aa4.4□□□□□ -1.71
COPS3-204ENST00000462236 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 LOC100509620A0A075B734 347 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 IGHV1-45A0A0A0MS14 117 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 A0A0J9YY10 115 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 OR5H15A6NDH6 313 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 C2orf74A8MZ97 194 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 HS3ST1O14792 307 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT1A9O60656 530 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 MITFO75030 526 aaPredicted RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 TPPPO94811 219 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ACAA1P09110 424 aaPredicted RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT2B7P16662 529 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT1A6P19224 532 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 UGT1A1P22309 533 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 CD151P48509 253 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 PRLHRP49683 370 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 EFNA3P52797 238 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 DLX5P56178 289 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 POLR2FP61218 127 aaKnown RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 IFI35P80217 286 aaPredicted RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 KLC1Q07866 573 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 KIF5AQ12840 1032 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ZBTB17Q13105 803 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 RBBP7Q16576 425 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 GPRC6AQ5T6X5 926 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 IRAK1BP1Q5VVH5 260 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 ZDHHC20Q5W0Z9 365 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 KIAA0930Q6ICG6 404 aaPredicted RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 PAPD4Q6PIY7 484 aaKnown RBP4.39□□□□□ -1.71
COPS3-204ENST00000462236 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 NDUFAF7Q7L592 441 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 CAMKMTQ7Z624 323 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 BEST3Q8N1M1 668 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 NIPA2Q8N8Q9 360 aa4.39□□□□□ -1.71
COPS3-204ENST00000462236 DNAAF3Q8N9W5 541 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms