RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 GXYLT2A0PJZ3 443 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 EFCAB9A8MZ26 197 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 TGFBR3LH3BV60 316 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 NSA2O95478 260 aaKnown RBP18.81■□□□□ 0.6
CCM2-203ENST00000461377 GABRA3P34903 492 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 IGLV3-21P80748 117 aaPredicted RBP18.81■□□□□ 0.6
CCM2-203ENST00000461377 FAM53BQ14153 422 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 DGUOKQ16854 277 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 DEFB133Q30KQ1 61 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 ARMCX4Q5H9R4 360 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 RRM2BQ7LG56 351 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 SPEM1Q8N4L4 309 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 OR8D4Q8NGM9 314 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 TEX47Q8TBZ9 253 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 ADAMTS18Q8TE60 1221 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 TSSK6Q9BXA6 273 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 DSN1Q9H410 356 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 BLACEA4D250 179 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 PEX12O00623 359 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 KLF4O43474 513 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 TLX2O43763 284 aaPredicted RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 AIREO43918 545 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 BRINP1O60477 761 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 DBTP11182 482 aaKnown RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 GADD45AP24522 165 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 FPR3P25089 353 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 MLLT3P42568 568 aaPredicted RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 GFERP55789 205 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 NCF4Q15080 339 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 FIGNL1Q6PIW4 674 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 LINC00299Q6ZSB3 139 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 MBOAT2Q6ZWT7 520 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 BCDIN3DQ7Z5W3 292 aaKnown RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 RANBP3LQ86VV4 465 aaPredicted RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 GALNT12Q8IXK2 581 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 SDR16C5Q8N3Y7 309 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 OR6C4Q8NGE1 309 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 WDR36Q8NI36 951 aaKnown RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 PEX11GQ96HA9 241 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 TMEM80Q96HE8 168 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 OR5M11Q96RB7 305 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 LMF2Q9BU23 707 aaKnown RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 ALOXE3Q9BYJ1 711 aa18.8■□□□□ 0.6
CCM2-203ENST00000461377 MRPS33Q9Y291 106 aaKnown RBP18.8■□□□□ 0.6
CCM2-203ENST00000461377 NPIPA5A0A0B4J1W7 369 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 TLCD2A6NGC4 264 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 NPIPA7E9PJI5 369 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 HRO43593 1189 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 CTNSO60931 367 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 NPIPA8P0DM63 369 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 STAT5AP42229 794 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 C14orf28Q4W4Y0 310 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 MRPL2Q5T653 305 aaKnown RBP18.79■□□□□ 0.6
CCM2-203ENST00000461377 GARNL3Q5VVW2 1013 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 SLC27A4Q6P1M0 643 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 ZNF595Q8IYB9 648 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 CAMKK1Q8N5S9 505 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 TMEM255BQ8WV15 326 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 VMP1Q96GC9 406 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 TGM7Q96PF1 710 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 SLC7A7Q9UM01 511 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 HYKKA2RU49 373 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 CDHR4A6H8M9 788 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 SOX30O94993 753 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 NADKO95544 446 aaPredicted RBP18.79■□□□□ 0.6
CCM2-203ENST00000461377 PRG2P13727 222 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 CSTF2P33240 577 aaKnown RBP eCLIP18.79■□□□□ 0.63e-8■■■■■ 39.8
CCM2-203ENST00000461377 UGT2B10P36537 528 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 TGFBR1P36897 503 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 RGS6P49758 472 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 MAT1AQ00266 395 aaKnown RBP18.79■□□□□ 0.6
CCM2-203ENST00000461377 MLLT1Q03111 559 aaPredicted RBP18.79■□□□□ 0.6
CCM2-203ENST00000461377 SLC13A2Q13183 592 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 SRSF5Q13243 272 aaKnown RBP18.79■□□□□ 0.6
CCM2-203ENST00000461377 SYT14P1Q58G82 188 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 RNLSQ5VYX0 342 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 NRMQ8IXM6 262 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 SIX5Q8N196 739 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 SLC15A4Q8N697 577 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 POGLUT1Q8NBL1 392 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 CHRNA10Q9GZZ6 450 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 FOLH1BQ9HBA9 442 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 PMF1-BGLAPU3KQ54 211 aa18.79■□□□□ 0.6
CCM2-203ENST00000461377 IGHV5-51A0A0C4DH38 117 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 PIP5K1CO60331 668 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 KCNK2O95069 426 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 RPLP0P05388 317 aaKnown RBP18.78■□□□□ 0.6
CCM2-203ENST00000461377 CALRP27797 417 aaKnown RBP18.78■□□□□ 0.6
CCM2-203ENST00000461377 HTR2AP28223 471 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 GRK5P34947 590 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 OPRL1P41146 370 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 CLK1P49759 484 aaKnown RBP18.78■□□□□ 0.6
CCM2-203ENST00000461377 RHAGQ02094 409 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 SNAPC1Q16533 368 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 ZHX1-C8orf76Q96EF9 292 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 LRR1Q96L50 414 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 ZNF582Q96NG8 517 aaPredicted RBP18.78■□□□□ 0.6
CCM2-203ENST00000461377 RAB33BQ9H082 229 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 PRTFDC1Q9NRG1 225 aa18.78■□□□□ 0.6
CCM2-203ENST00000461377 EPHA6Q9UF33 1036 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms