RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 WDR1O75083 606 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 KCNK2O95069 426 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 UTS2O95399 124 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 PGRP06401 933 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 NGFRP08138 427 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 CELA3AP09093 270 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 GABRA1P14867 456 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 MATN1P21941 496 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 PTGER4P35408 488 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 ANXA11P50995 505 aaKnown RBP14.74□□□□□ -0.05
CD28-203ENST00000458610 NME5P56597 212 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 C17orf67Q0P5P2 114 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 EXOSC6Q5RKV6 272 aaKnown RBP14.74□□□□□ -0.05
CD28-203ENST00000458610 XKRXQ6PP77 449 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 MAVSQ7Z434 540 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 CD163Q86VB7 1156 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 CLECL1Q8IZS7 167 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 MIER2Q8N344 545 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 WDSUB1Q8N9V3 476 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 OR4K17Q8NGC6 315 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 RNF138Q8WVD3 245 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 CCDC115Q96NT0 180 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 OR52B2Q96RD2 323 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 SIKE1Q9BRV8 207 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 RMND5AQ9H871 391 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 SERHLQ9NQF3 203 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 SDR39U1Q9NRG7 319 aaPredicted RBP14.74□□□□□ -0.05
CD28-203ENST00000458610 UBQLN4Q9NRR5 601 aa14.74□□□□□ -0.05
CD28-203ENST00000458610 C15orf38-AP3S2A0A0A6YYH1 394 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 RNF103-CHMP3A0A140T963 221 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 SCO2O43819 266 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 SCN2BO60939 215 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 ACTL6AO96019 429 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 AK1P00568 194 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 AGAP20933 346 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 TBXA2RP21731 343 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 SRD5A2P31213 254 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 TRPC1P48995 793 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 IDH3AP50213 366 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 AQP5P55064 265 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 TXNL4AP83876 142 aaKnown RBP14.73□□□□□ -0.05
CD28-203ENST00000458610 ANKRD46Q86W74 232 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 PM20D2Q8IYS1 436 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 ZNF808Q8N4W9 903 aaPredicted RBP14.73□□□□□ -0.05
CD28-203ENST00000458610 OR14L1PQ8NHC6 308 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 GOT1L1Q8NHS2 421 aaPredicted RBP14.73□□□□□ -0.05
CD28-203ENST00000458610 FBXO30Q8TB52 745 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 CCDC120Q96HB5 630 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 PHF12Q96QT6 1004 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 PANX1Q96RD7 426 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 SLC6A15Q9H2J7 730 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 EXD2Q9NVH0 621 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 GPATCH2Q9NW75 528 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 ZNF446Q9NWS9 450 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 LIPGQ9Y5X9 500 aa14.73□□□□□ -0.05
CD28-203ENST00000458610 AHRRA9YTQ3 701 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 FAM47E-STBD1D6RA91 191 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 SCDO00767 359 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 ZG16O60844 167 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 ENDOUP21128 410 aaKnown RBP14.72□□□□□ -0.05
CD28-203ENST00000458610 ACVR2AP27037 513 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 CHI3L1P36222 383 aaPredicted RBP14.72□□□□□ -0.05
CD28-203ENST00000458610 GAS1P54826 345 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 DSCR4P56555 118 aaPredicted RBP14.72□□□□□ -0.05
CD28-203ENST00000458610 PHC1P78364 1004 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 NHSL2Q5HYW2 709 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 ATAD3BQ5T9A4 648 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 ZNF585AQ6P3V2 769 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 FIGNL1Q6PIW4 674 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 MSANTD1Q6ZTZ1 278 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 MRGPRGQ86SM5 289 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 MISPQ8IVT2 679 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 ZNF527Q8NB42 609 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 FAM83FQ8NEG4 500 aaPredicted RBP14.72□□□□□ -0.05
CD28-203ENST00000458610 OR5AK3PQ8NH89 298 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 DUSP19Q8WTR2 217 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 STON2Q8WXE9 905 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 CDS1Q92903 461 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 SLC35G5Q96KT7 338 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 OR7D2Q96RA2 312 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 OR2B2Q9GZK3 357 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 TMEM45AQ9NWC5 275 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 ALKBH4Q9NXW9 302 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 COQ3Q9NZJ6 369 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 DKKL1Q9UK85 242 aa14.72□□□□□ -0.05
CD28-203ENST00000458610 PRRC2CQ9Y520 2896 aaKnown RBP14.72□□□□□ -0.05
CD28-203ENST00000458610 NINQ8N4C6 2090 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 FAM234BA2RU67 622 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 ALG1L2C9J202 215 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 H3BNH8 94 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 ZNHIT1O43257 154 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 NDUFB5O43674 189 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 ANGPTL1O95841 491 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 IGKV1D-16P01601 117 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 GP1BBP13224 206 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 DPP4P27487 766 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 MSX1P28360 303 aa14.71□□□□□ -0.05
CD28-203ENST00000458610 MRPL19P49406 292 aaKnown RBP14.71□□□□□ -0.05
CD28-203ENST00000458610 POLR2JP52435 117 aaKnown RBP14.71□□□□□ -0.05
CD28-203ENST00000458610 DGKQP52824 942 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms