RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 EI24O14681 340 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 PCDH17O14917 1159 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 GCM2O75603 506 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 NKX2-2O95096 273 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ONECUT2O95948 504 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ALBP02768 609 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 DBIP07108 87 aaKnown RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 KLK3P07288 261 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 FESP07332 822 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 THBS1P07996 1170 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 CHRM4P08173 479 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ACP2P11117 423 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ZNF26P17031 533 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 RHCEP18577 417 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 CD247P20963 164 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 MAOAP21397 527 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 PRKAR1BP31321 381 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 PTGER1P34995 402 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 TSPAN7P41732 249 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 KCNJ5P48544 419 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 VLDLRP98155 873 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 MC2RQ01718 297 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 SPIBQ01892 262 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 MGAT2Q10469 447 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 FUT7Q11130 342 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ZNF267Q14586 743 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 NRF1Q16656 503 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 DUSP5Q16690 384 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 NKAIN1Q4KMZ8 207 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 LIN52Q52LA3 116 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 EXOSC6Q5RKV6 272 aaKnown RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 DCST2Q5T1A1 773 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 C1orf189Q5VU69 101 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 MLIPQ5VWP3 458 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 DHRS4L2Q6PKH6 230 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 VASH1Q7L8A9 365 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 STK32CQ86UX6 486 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 EPHX4Q8IUS5 362 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 TMEM151BQ8IW70 566 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 TAGAPQ8N103 731 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ZNF619Q8N2I2 560 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 PLPP5Q8NEB5 264 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 PIK3C3Q8NEB9 887 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 OR52R1Q8NGF1 315 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 GPR151Q8TDV0 419 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 METTL21AQ8WXB1 218 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 HOXB13Q92826 284 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 C16orf58Q96GQ5 468 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 FBXL20Q96IG2 436 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 C7orf34Q96L11 122 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 LRFN5Q96NI6 719 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ZNF300Q96RE9 604 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 PIP5K1AQ99755 562 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ZPBPQ9BS86 351 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ZNF350Q9GZX5 532 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 GABARAPL1Q9H0R8 117 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 MTHFD2LQ9H903 347 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 FOLH1BQ9HBA9 442 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 FBXO8Q9NRD0 319 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 USE1Q9NZ43 259 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 C19orf25Q9UFG5 118 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 GPN3Q9UHW5 284 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 C3orf18Q9UK00 162 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 ERVK-19Q9WJR5 959 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 HEMK1Q9Y5R4 338 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
VPS50-207ENST00000458530 USP9YO00507 2555 aaPredicted RBP8.31□□□□□ -1.08
VPS50-207ENST00000458530 TCRBV16S1A1N1A0A5B0 115 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 OR6C76A6NM76 312 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 SOCS2O14508 198 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 DENRO43583 198 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 CBX7O95931 251 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 HEXBP07686 556 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 CT62P0C5K7 136 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 PABPC4LP0CB38 370 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 THRBP10828 461 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 RRM2P31350 389 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 TRHRP34981 398 aaPredicted RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 RORAP35398 523 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 DCTP40126 519 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 RPS6KA3P51812 740 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 PGDP52209 483 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 CRYBA2P53672 197 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 UCNP55089 124 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 TMPRSS3P57727 454 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 DCAF7P61962 342 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 BTG2P78543 158 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 RHAGQ02094 409 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 FUT5Q11128 374 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 EIF3IQ13347 325 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 ERV3-1Q14264 604 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 EXOSC7Q15024 291 aaKnown RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 NSDHLQ15738 373 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 CCDC157Q569K6 752 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 ZNF311Q5JNZ3 666 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 OTUD3Q5T2D3 398 aaPredicted RBP8.3□□□□□ -1.08
VPS50-207ENST00000458530 HLA-DQA1Q5Y7H0 255 aa8.3□□□□□ -1.08
VPS50-207ENST00000458530 PWWP2BQ6NUJ5 590 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms