RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RNFT2Q96EX2 444 aa11.63□□□□□ -0.55
LINC00959-201ENST00000456581 C16orf58Q96GQ5 468 aa11.63□□□□□ -0.55
LINC00959-201ENST00000456581 ZNF354BQ96LW1 612 aa11.63□□□□□ -0.55
LINC00959-201ENST00000456581 RPRD1BQ9NQG5 326 aaKnown RBP11.63□□□□□ -0.55
LINC00959-201ENST00000456581 ZNF624Q9P2J8 865 aaPredicted RBP11.63□□□□□ -0.55
LINC00959-201ENST00000456581 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ZC3H12DA2A288 527 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 LRIT2A6NDA9 550 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 HMX3A6NHT5 357 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 CD8B2A6NJW9 211 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SHISA7A6NL88 538 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ISM1B1AKI9 464 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 PLOD3O60568 738 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ERAL1O75616 437 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 RASGRP1O95267 797 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SLC2A10O95528 541 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 NR2F1P10589 423 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 CD8BP10966 210 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 EVI2BP34910 448 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ACTR1BP42025 376 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SSR2P43308 183 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 GIPRP48546 466 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 AGFG1P52594 562 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 GAS1P54826 345 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ACTR1AP61163 376 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 MLLT11Q13015 90 aaPredicted RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 C1DQ13901 141 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 NCF4Q15080 339 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 CNIH2Q6PI25 160 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 IL20RBQ6UXL0 311 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SLC44A3Q8N4M1 653 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 PROKR2Q8NFJ6 384 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 OR2L3Q8NG85 312 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 FAM131CQ96AQ9 280 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 OR2M4Q96R27 311 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 FNDC11Q9BVV2 318 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SLC22A4Q9H015 551 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 TCEAL2Q9H3H9 227 aaPredicted RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 CDCP1Q9H5V8 836 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ARID1BQ8NFD5 2236 aaPredicted RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SEC16AO15027 2179 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 A8MVJ9 347 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 TNFRSF10AO00220 468 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 BTN3A3O00478 584 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 FAAHO00519 579 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 PGRMC2O15173 223 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ERI3O43414 337 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 LANCL1O43813 399 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 TSC22D2O75157 780 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 CHRM4P08173 479 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ENDOUP21128 410 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 HSD17B2P37059 387 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 FUT5Q11128 374 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 LASP1Q14847 261 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 TATDN3Q17R31 274 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SLC35F1Q5T1Q4 408 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SLC30A6Q6NXT4 461 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SLC38A6Q8IZM9 456 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 RAB42Q8N4Z0 105 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 OR2L8Q8NGY9 312 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 UPRTQ96BW1 309 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 TESQ9UGI8 421 aaKnown RBP11.62□□□□□ -0.55
LINC00959-201ENST00000456581 MGAT4BQ9UQ53 548 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 ALG5Q9Y673 324 aa11.62□□□□□ -0.55
LINC00959-201ENST00000456581 FAM183AA6NL82 134 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 CPSF4LA6NMK7 179 aaKnown RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 GPR89AB7ZAQ6 455 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 CASKO14936 926 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 POLR1CO15160 346 aaPredicted RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 RAB36O95755 333 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 GPR89BP0CG08 455 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 POU3F3P20264 500 aaPredicted RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 TOR1AIP1Q5JTV8 583 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 LAPTM4BQ86VI4 370 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 KCT2Q8NC54 265 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 ENKURQ8TC29 256 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 RGMAQ96B86 450 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 MTERF3Q96E29 417 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 FAM46AQ96IP4 442 aaKnown RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 FUZQ9BT04 418 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 PCBD2Q9H0N5 130 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 RNF121Q9H920 327 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 ZCCHC3Q9NUD5 404 aaKnown RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 WDFY4Q6ZS81 3184 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 IQCMA0A1B0GVH7 501 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 PRICKLE3O43900 615 aaPredicted RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 ALX3O95076 343 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 EIF2S1P05198 315 aaKnown RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 CELA2BP08218 269 aaPredicted RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 GABRG2P18507 467 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 FUT1P19526 365 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 CERS1P27544 350 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 NDUFAF5Q5TEU4 345 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 C18orf63Q68DL7 685 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 LAMTOR1Q6IAA8 161 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 OR4C11Q6IEV9 310 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 IKBIPQ70UQ0 350 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 PRICKLE2Q7Z3G6 844 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms