RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 VPS26BQ4G0F5 336 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 CYP27C1Q4G0S4 372 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 CT45A2Q5DJT8 189 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 XKR7Q5GH72 579 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 TNFAIP8L3Q5GJ75 292 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 C6orf136Q5SQH8 315 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 BEND6Q5SZJ8 279 aaPredicted RBP11.76□□□□□ -0.53
TREX1-203ENST00000456089 CPTPQ5TA50 214 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 IL23RQ5VWK5 629 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 TIGD3Q6B0B8 471 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 ZNF551Q7Z340 670 aaPredicted RBP11.76□□□□□ -0.53
TREX1-203ENST00000456089 LACC1Q8IV20 430 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 OR2L13Q8N349 312 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 ZNF781Q8N8C0 355 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 C9orf106Q8NAJ2 232 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 OR6Y1Q8NGX8 325 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 ABTB1Q969K4 478 aaPredicted RBP11.76□□□□□ -0.53
TREX1-203ENST00000456089 NTNG2Q96CW9 530 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 C3orf30Q96M34 536 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 CLEC4MQ9H2X3 399 aaPredicted RBP11.76□□□□□ -0.53
TREX1-203ENST00000456089 EQTNQ9NQ60 294 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 GIMAP2Q9UG22 337 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 PLEKHA6Q9Y2H5 1048 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 NF1P21359 2839 aa11.76□□□□□ -0.53
TREX1-203ENST00000456089 MTORP42345 2549 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 TTC36A6NLP5 189 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 EEF1E1-BLOC1S5C9J1V9 151 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 SNPHO15079 494 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 SCAMP2O15127 329 aaKnown RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 EEF1E1O43324 174 aaKnown RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 TBX19O60806 448 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 KCNH1O95259 989 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 IL2RAP01589 272 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 DHRS4L1P0CG22 281 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 CD1EP15812 388 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 PRPS1L1P21108 318 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 GABRA3P34903 492 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 RFX3P48380 749 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 CLK3P49761 638 aaKnown RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 PNLIPRP2P54317 469 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 PRR5P85299 388 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 FOXF2Q12947 444 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 FLYWCH1Q4VC44 716 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 TMEM81Q6P7N7 255 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 TRIM42Q8IWZ5 723 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 NATD1Q8N6N6 113 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 LINC01560Q8TB33 94 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 EFHD2Q96C19 240 aaPredicted RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 CHMP6Q96FZ7 201 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 SLC35A4Q96G79 324 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 TUBA1CQ9BQE3 449 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 RASSF1Q9NS23 344 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 ACSS1Q9NUB1 689 aaPredicted RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 NOP53Q9NZM5 478 aaKnown RBP11.75□□□□□ -0.53
TREX1-203ENST00000456089 ATP6V1HQ9UI12 483 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 CBLCQ9ULV8 474 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 SNX8Q9Y5X2 465 aa11.75□□□□□ -0.53
TREX1-203ENST00000456089 A0A1W2PRB8 838 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 A6NNC1 897 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 CFLARO15519 480 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 EMC8O43402 210 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 CBR3O75828 277 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 IFI6P09912 130 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 TIMP3P35625 211 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 STARP49675 285 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 PSG6Q00889 435 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 EMX2Q04743 252 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 PDE7AQ13946 482 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 MPP2Q14168 576 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 CASP8Q14790 479 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 PTGR1Q14914 329 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 LSM12Q3MHD2 195 aaKnown RBP11.74□□□□□ -0.53
TREX1-203ENST00000456089 SPDYE7PQ495Y7 208 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 ZNF385BQ569K4 471 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 OR5M10Q6IEU7 315 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 NPSR1Q6W5P4 371 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 CDC20BQ86Y33 519 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 PM20D2Q8IYS1 436 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 GOLGA6L1Q8N7Z2 621 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 WDSUB1Q8N9V3 476 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 NUP43Q8NFH3 380 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 OR7A2PQ8NGA2 310 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 OR4N2Q8NGD1 307 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 OR14L1PQ8NHC6 308 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 GPR151Q8TDV0 419 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 SLC9A6Q92581 669 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 ZNF395Q9H8N7 513 aaPredicted RBP11.74□□□□□ -0.53
TREX1-203ENST00000456089 TMBIM4Q9HC24 238 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 SDHAF3Q9NRP4 125 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
TREX1-203ENST00000456089 ST6GALNAC2Q9UJ37 374 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 FBXL2Q9UKC9 423 aa11.74□□□□□ -0.53
TREX1-203ENST00000456089 MBD3L4A6NDZ8 208 aaPredicted RBP11.73□□□□□ -0.53
TREX1-203ENST00000456089 MBD3L3A6NE82 208 aaPredicted RBP11.73□□□□□ -0.53
TREX1-203ENST00000456089 MBD3L5A6NJ08 208 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms