RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 WACQ9BTA9 647 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF391Q9UJN7 358 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GPR39O43194 453 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 CDK14O94921 469 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ADH4P08319 380 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 STSP08842 583 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GAAP10253 952 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 BMP4P12644 408 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 CCR7P32248 378 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ETV5P41161 510 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ARF3P61204 181 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ARF1P84077 181 aaKnown RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLAMF1Q13291 335 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TATDN3Q17R31 274 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 FAM69BQ5VUD6 431 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MARCH9Q86YJ5 346 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TREML1Q86YW5 311 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 CBARPQ8N350 705 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 OR9A2Q8NGT5 310 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM125Q96AQ2 219 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 C12orf42Q96LP6 360 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM185BQ9H7F4 350 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC2A4RGQ9NR83 387 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF586Q9NXT0 402 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 PCP4L1A6NKN8 68 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC16A6O15403 523 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 KCNE1P15382 129 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 AGXTP21549 392 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 BDKRB2P30411 391 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ABCG1P45844 678 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 S100A10P60903 97 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 RAB11AP62491 216 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 PPIGQ13427 754 aaKnown RBP eCLIP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ACOT6Q3I5F7 207 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MAMDC2Q7Z304 686 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 OR6Q1Q8NGQ2 317 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 NT5C3BQ969T7 300 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 DGAT2Q96PD7 388 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MFFQ9GZY8 342 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ADAP2Q9NPF8 381 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 CA5BQ9Y2D0 317 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 FAM96BQ9Y3D0 163 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TNFRSF10AO00220 468 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 LILRB5O75023 590 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GLUD1P00367 558 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 NDUFV1P49821 464 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 DCST2Q5T1A1 773 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 AGBL4Q5VU57 503 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ETFRF1Q6IPR1 90 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GALNTL5Q7Z4T8 443 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 EDAQ92838 391 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SAMD10Q9BYL1 202 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 NANOGQ9H9S0 305 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ACSS1Q9NUB1 689 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 AIG1Q9NVV5 245 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 FZD10Q9ULW2 581 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 COPS3Q9UNS2 423 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 C2orf72A6NCS6 295 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 NCR1O76036 304 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 DDOSTP39656 456 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 KLF1Q13351 362 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 YIF1BQ5BJH7 314 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 GK5Q6ZS86 529 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF627Q7L945 461 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MFSD9Q8NBP5 474 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 PLPP5Q8NEB5 264 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ABHD11Q8NFV4 315 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 LNX1Q8TBB1 728 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC22A8Q8TCC7 542 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 BIRC7Q96CA5 298 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 BCO2Q9BYV7 579 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 AKTIPQ9H8T0 292 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC22A5O76082 557 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SOX18P35713 384 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 F2RL1P55085 397 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 IL13RA1P78552 427 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MKRN4PQ13434 485 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 OR4M1Q8NGD0 313 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MITD1Q8WV92 249 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM175Q9BSA9 504 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 VCX2Q9H322 139 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SEMA4GQ9NTN9 838 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MOKQ9UQ07 419 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 WDR45Q9Y484 360 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 BTAF1O14981 1849 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 MFSD11O43934 449 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ORM1P02763 201 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 INHAP05111 366 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ALPIP09923 528 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 POLR2CP19387 275 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 CHRNB4P30926 498 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ARL2P36404 184 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 BDKRB1P46663 353 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 ASCL1P50553 236 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 SNRPGP62308 76 aaKnown RBP4.96□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM244Q5VVB8 128 aa4.96□□□□□ -1.62
CSMD3-204ENST00000455883 LYSMD3Q7Z3D4 306 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms