RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DUSP2Q05923 314 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 PRICKLE4Q2TBC4 344 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 TRMT5Q32P41 509 aaKnown RBP15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 PAGE3Q5JUK9 113 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 ARHGAP11AQ6P4F7 1023 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 FAM111BQ6SJ93 734 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 DHDDSQ86SQ9 333 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 SLC22A16Q86VW1 577 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 SLC15A4Q8N697 577 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 OR10G3Q8NGC4 313 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 PSMA8Q8TAA3 256 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 ANKRD27Q96NW4 1050 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 DMRTA2Q96SC8 542 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 DCLRE1BQ9H816 532 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 RNPEPL1Q9HAU8 725 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 IL1RL2Q9HB29 575 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 PLSCR2Q9NRY7 297 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 NUP214P35658 2090 aaPredicted RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 A0A087WV62 115 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 OR6C76A6NM76 312 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 E9PLN8 166 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 EMC8O43402 210 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 FREM3P0C091 2139 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 FBXO45P0C2W1 286 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 PRF1P14222 555 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 CD1EP15812 388 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 PPIBP23284 216 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 CCT3P49368 545 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 NUDT2P50583 147 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 FUT7Q11130 342 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 FOXO1Q12778 655 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 ZNF630Q2M218 657 aaPredicted RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 ZNF628Q5EBL2 1059 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 HLA-DQA1Q5Y7H0 255 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 TMEM107Q6UX40 140 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 NET1Q7Z628 596 aaPredicted RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 VWA5B2Q8N398 1253 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 ZNF615Q8N8J6 731 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 RBM15BQ8NDT2 890 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 ADCY4Q8NFM4 1077 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 OR5M9Q8NGP3 310 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 SFXN5Q8TD22 340 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 PAQR8Q8TEZ7 354 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 ELP4Q96EB1 424 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 VKORC1Q9BQB6 163 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 INPP5KQ9BT40 448 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 OR10A5Q9H207 317 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 ZDHHC11Q9H8X9 412 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 PROK2Q9HC23 129 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 SH2D2AQ9NP31 389 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 SERHLQ9NQF3 203 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 DDX18Q9NVP1 670 aaKnown RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 MAT2BQ9NZL9 334 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 TNFRSF10DQ9UBN6 386 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 CACNA1CQ13936 2221 aa15.63■□□□□ 0.09
PRPF40A-204ENST00000450303 C19orf84I3L1E1 186 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 PLOD3O60568 738 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 COQ9O75208 318 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CLDN14O95500 239 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 KRT75O95678 551 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CHI3L1P36222 383 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CDK9P50750 372 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 EXOSC7Q15024 291 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 LTB4RQ15722 352 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 EMC4Q5J8M3 183 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 LRIF1Q5T3J3 769 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 C16orf89Q6UX73 402 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 HACD2Q6Y1H2 254 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 SZRD1Q7Z422 152 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 RETREG3Q86VR2 466 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 PRR22Q8IZ63 422 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 FAM109AQ8N4B1 249 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 RPRMLQ8N4K4 120 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 MARVELD2Q8N4S9 558 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 ZNF441Q8N8Z8 693 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 SIMC1Q8NDZ2 872 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 OR7G1Q8NGA0 311 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 OR56A1Q8NGH5 318 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 KAT2AQ92830 837 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 SDCCAG3Q96C92 435 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CTHRC1Q96CG8 243 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 JSRP1Q96MG2 331 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 SH3GL1Q99961 368 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 HOPXQ9BPY8 73 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 SLC35A5Q9BS91 424 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 PAIP1Q9H074 479 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 RAD21L1Q9H4I0 556 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 PNPLA3Q9NST1 481 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 ZCCHC3Q9NUD5 404 aaKnown RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 BCAP29Q9UHQ4 241 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CORO2BQ9UQ03 480 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CFL2Q9Y281 166 aa15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 CHCHD2Q9Y6H1 151 aaPredicted RBP15.62■□□□□ 0.09
PRPF40A-204ENST00000450303 C15orf38-AP3S2A0A0A6YYH1 394 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 EVPLLA8MZ36 301 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 GSNP06396 782 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 RFPL3SP0C7P2 107 aa15.61■□□□□ 0.09
PRPF40A-204ENST00000450303 AGAP20933 346 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms