RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 CPNE6O95741 557 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 CBX7O95931 251 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 HBQ1P09105 142 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 NID1P14543 1247 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 TRHRP34981 398 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 GRK6P43250 576 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 MVKQ03426 396 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 FUT7Q11130 342 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 ZNF267Q14586 743 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 EXOSC7Q15024 291 aaKnown RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 GPR68Q15743 365 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 CTU2Q2VPK5 515 aaKnown RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 CNPY1Q3B7I2 92 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 SNAP47Q5SQN1 464 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 ZNF770Q6IQ21 691 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 QSOX2Q6ZRP7 698 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 BPHLQ86WA6 291 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 OR9Q2Q8NGE9 314 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 OR4D11Q8NGI4 311 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 ZNF420Q8TAQ5 688 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 MYDGFQ969H8 173 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 GTPBP3Q969Y2 492 aaKnown RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 ART5Q96L15 291 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 MCHR1Q99705 422 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 NIPSNAP1Q9BPW8 284 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 TEX12Q9BXU0 123 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 SLC7A5P2Q9GIP4 190 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 YIPF3Q9GZM5 350 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 POLR1BQ9H9Y6 1135 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 FOLH1BQ9HBA9 442 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 RSL24D1Q9UHA3 163 aaKnown RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 MRTO4Q9UKD2 239 aaKnown RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 PCDHGB1Q9Y5G3 927 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 PCDHGA6Q9Y5G7 932 aa11.69□□□□□ -0.54
NUP85-202ENST00000449421 HEMK1Q9Y5R4 338 aaPredicted RBP11.69□□□□□ -0.54
NUP85-202ENST00000449421 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 LY6G6EA0A0G2JKS1 128 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 TRBV4-1A0A0J9YWV2 114 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 CPED1A4D0V7 1026 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 SH3D21A4FU49 640 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 C4orf47A7E2U8 309 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 H3BMH7 237 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 KIAA0513O60268 411 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 GDF9O60383 454 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 BRINP1O60477 761 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 FAM20BO75063 409 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 MED26O95402 600 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 CTSBP07858 339 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 CT62P0C5K7 136 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 S1PR1P21453 382 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 FBLP22087 321 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 RPS4Y1P22090 263 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 KRT20P35900 424 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 MAT1AQ00266 395 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 TARDBPQ13148 414 aaKnown RBP eCLIP11.68□□□□□ -0.544e-8■■■■■ 32.5
NUP85-202ENST00000449421 PTGES3Q15185 160 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 DECR1Q16698 335 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 STPG1Q5TH74 334 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 C1orf94Q6P1W5 598 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 PODNL1Q6PEZ8 512 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 KLHL17Q6TDP4 642 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 B3GNT6Q6ZMB0 384 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 PLEKHM3Q6ZWE6 761 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 PIP4P1Q86T03 277 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 RBM45Q8IUH3 476 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 LACC1Q8IV20 430 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 CMIPQ8IY22 773 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 RNF113BQ8IZP6 322 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 EID2Q8N6I1 236 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 ZNF540Q8NDQ6 660 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 OR4D9Q8NGE8 314 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 RHOXF1Q8NHV9 184 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 FAM81AQ8TBF8 368 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 PTCHD1Q96NR3 888 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 FUZQ9BT04 418 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 PRRG3Q9BZD7 231 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 OR10A5Q9H207 317 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 DUSP21Q9H596 190 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 MKKSQ9NPJ1 570 aaPredicted RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 FGF21Q9NSA1 209 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 RLIMQ9NVW2 624 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 CLN6Q9NWW5 311 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 U3KQA8 63 aa11.68□□□□□ -0.54
NUP85-202ENST00000449421 SNRNP200O75643 2136 aaKnown RBP11.68□□□□□ -0.54
NUP85-202ENST00000449421 A0A1B0GX78 115 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 ZAR1LA6NP61 321 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 A8MU76 341 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 PTGES3LE9PB15 166 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 RGS10O43665 173 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 SIGLEC6O43699 453 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 GFRA3O60609 400 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 CBFA2T3O75081 653 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 KCNK2O95069 426 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 EPPINO95925 133 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 CKMT1AP12532 417 aa11.67□□□□□ -0.54
NUP85-202ENST00000449421 POU2F1P14859 743 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms