RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MTHFD2LQ9H903 347 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 OLAHQ9NV23 265 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 AKAP13Q12802 2813 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 TCRBV5S2A0A599 114 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 OR6C70A6NIJ9 312 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 C1QTNF9BB2RNN3 333 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 M0QX08 132 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 PPM1BO75688 479 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 FBXO45P0C2W1 286 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 C1QTNF9P0C862 333 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ITGA3P26006 1051 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 KRT20P35900 424 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 RFX3P48380 749 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ACTR3P61158 418 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 TLE3Q04726 772 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ELOAQ14241 798 aaKnown RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 FLYWCH1Q4VC44 716 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 LRRC23Q53EV4 343 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 FCRLBQ6BAA4 426 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 GALNT16Q8N428 558 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 SIRT6Q8N6T7 355 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ING2Q9H160 280 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 DENND2DQ9H6A0 471 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 DCAF13Q9NV06 445 aaKnown RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 EXPH5Q8NEV8 1989 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 AGAP5A6NIR3 686 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 AQP12BA6NM10 295 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ABCB7O75027 752 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 REM1O75628 298 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 MFN2O95140 757 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 SERPINA1P01009 418 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 IL12BP29460 328 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 TMED10P49755 219 aaKnown RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ELF3P78545 371 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 CCNIQ14094 377 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 KPNB1Q14974 876 aaKnown RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 GPR68Q15743 365 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 MEP1AQ16819 746 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ACER2Q5QJU3 275 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 B3GNTL1Q67FW5 361 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 CBLL1Q75N03 491 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 AQP12AQ8IXF9 295 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 EID3Q8N140 333 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 OIT3Q8WWZ8 545 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ZG16BQ96DA0 208 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF354BQ96LW1 612 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 LRGUKQ96M69 825 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 RNF145Q96MT1 663 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 COL21A1Q96P44 957 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 ADOQ96SZ5 270 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 SPATA5L1Q9BVQ7 753 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 QRSL1Q9H0R6 528 aaKnown RBP12.94□□□□□ -0.34
SHMT2-203ENST00000449049 KCNE5Q9UJ90 142 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 RAXQ9Y2V3 346 aa12.94□□□□□ -0.34
SHMT2-203ENST00000449049 TMEM229AB2RXF0 380 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 UGT2B11O75310 529 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 SERPINB7O75635 380 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 UGT2B17O75795 530 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 DNAJB5O75953 348 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 ATP6V1G2O95670 118 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 IFNA14P01570 189 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 ALPPP05187 535 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 CYP4B1P13584 511 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 DCTP40126 519 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 SSR4P51571 173 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF141Q15928 474 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 DEFB109BQ30KR1 87 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 CYBRD1Q53TN4 286 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 BROXQ5VW32 411 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 OPN5Q6U736 354 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 APLFQ8IW19 511 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-203ENST00000449049 DND1Q8IYX4 353 aaKnown RBP12.93□□□□□ -0.34
SHMT2-203ENST00000449049 SPPL2AQ8TCT8 520 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 ITFG2Q969R8 447 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 SPACA9Q96E40 222 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-203ENST00000449049 HOXD1Q9GZZ0 328 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 RPS6KA6Q9UK32 745 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 CPAMD8Q8IZJ3 1885 aa12.93□□□□□ -0.34
SHMT2-203ENST00000449049 NPIPA5A0A0B4J1W7 369 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 CENPVL1A0A0U1RR11 272 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 TCRBV3S1A0A5B6 114 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 NPIPA7E9PJI5 369 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 OPN1SWP03999 348 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 PABPC4LP0CB38 370 aaKnown RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 NPIPA8P0DM63 369 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 SOX3P41225 446 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 ATP12AP54707 1039 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 RIPK1Q13546 671 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 EFR3AQ14156 821 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 MAPK14Q16539 360 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 NTRK2Q16620 822 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 IRAK1BP1Q5VVH5 260 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 LRRC69Q6ZNQ3 347 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 EIF3MQ7L2H7 374 aaKnown RBP12.92□□□□□ -0.34
SHMT2-203ENST00000449049 ARMC8Q8IUR7 673 aa12.92□□□□□ -0.34
SHMT2-203ENST00000449049 PEX5LQ8IYB4 626 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms