RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 A0A1B0GX78 115 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 H3BML4 177 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 H3BSH0 61 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CTNSO60931 367 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 HLA-DPB1P04440 258 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PNMTP11086 282 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OSMP13725 252 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PRKCAP17252 672 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CCNOP22674 350 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 IL12AP29459 219 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SFTPDP35247 375 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CPOXP36551 454 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LIM2P55344 173 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SGCAQ16586 387 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LAS2Q8IYD9 372 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CADM4Q8NFZ8 388 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 BAHD1Q8TBE0 780 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ZFP90Q8TF47 636 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ASB12Q8WXK4 309 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 NSMAFQ92636 917 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PRRC1Q96M27 445 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TMEM185BQ9H7F4 350 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ASIC5Q9NY37 505 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CNOT11Q9UKZ1 510 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 RNF215Q9Y6U7 377 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OTOFQ9HC10 1997 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ARID2Q68CP9 1835 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PRAMEF33A0A0G2JMD5 474 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OTOL1A6NHN0 477 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 WASHC1A8K0Z3 465 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LCMT2O60294 686 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 AZGP1P25311 298 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TEAD1P28347 426 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ZNF84P51523 738 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CTXN1P60606 82 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CBFBQ13951 182 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 GTF2IRD2BQ6EKJ0 949 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 WASH2PQ6VEQ5 465 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 GTF2IRD2Q86UP8 949 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SLC38A5Q8WUX1 472 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TMEM239Q8WW34 195 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ZNF583Q96ND8 569 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SECISBP2Q96T21 854 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PADI1Q9ULC6 663 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 MMACHCQ9Y4U1 282 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 MYO10Q9HD67 2058 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LMO7DNF2Z398 122 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 AHCYL1O43865 530 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SLC35E2P0CK97 266 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 GLB1P16278 677 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CD1CP29017 333 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CNR2P34972 360 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 KCNJ10P78508 379 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ARG2P78540 354 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 E2F1Q01094 437 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SRYQ05066 204 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 EIF4EBP2Q13542 120 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 C1orf94Q6P1W5 598 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 HS3ST5Q8IZT8 346 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OR4K13Q8NH42 304 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LRRC61Q9BV99 259 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 NPLQ9BXD5 320 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OR10A5Q9H207 317 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ANKRA2Q9H9E1 313 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 UPB1Q9UBR1 384 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 NXT1Q9UKK6 140 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 GPC6Q9Y625 555 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ZNF879B4DU55 563 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 ACOX3O15254 700 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 IDH3BO43837 385 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CKMT1AP12532 417 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 C4BPBP20851 252 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 MAOAP21397 527 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 FAUP35544 74 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 CAPZBP47756 277 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TAS2R43P59537 309 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PIGFQ07326 219 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 PAPD4Q6PIY7 484 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OPN5Q6U736 354 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 MARVELD2Q8N4S9 558 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 IQCF1Q8N6M8 205 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 OR5T3Q8NGG3 340 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 THAP4Q8WY91 577 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SAMD8Q96LT4 415 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TMEM121BQ9BXQ6 578 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 DCSTAMPQ9H295 470 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TCEAL2Q9H3H9 227 aaPredicted RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 LYRM4Q9HD34 91 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 TMEM138Q9NPI0 162 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 USP36Q9P275 1121 aaKnown RBP6.94□□□□□ -1.3
SYNE1-213ENST00000448038 BAIAP2Q9UQB8 552 aa6.94□□□□□ -1.3
SYNE1-213ENST00000448038 SLC22A31A6NKX4 558 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 H3BSA7 217 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 ARL6IP5O75915 188 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 CTBP2P56545 445 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 MAP4K2Q12851 820 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 C3orf38Q5JPI3 329 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 TMEM236Q5W0B7 351 aa6.93□□□□□ -1.3
SYNE1-213ENST00000448038 OR5M10Q6IEU7 315 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms