RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NLRP9Q7RTR0 991 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 BIVMQ86UB2 503 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 OR4N5Q8IXE1 308 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 SLC22A15Q8IZD6 547 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 ICA1LQ8NDH6 482 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 C17orf47Q8NEP4 570 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 OR4D10Q8NGI6 311 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 GATAD1Q8WUU5 269 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 ZNRF4Q8WWF5 429 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 STARD8Q92502 1023 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 PEX13Q92968 403 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 MYLPFQ96A32 169 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 SH3YL1Q96HL8 342 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 AMDHD1Q96NU7 426 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 RPRD1AQ96P16 312 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 BCL7BQ9BQE9 202 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CHRDL1Q9BU40 450 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 APOOQ9BUR5 198 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 GPN2Q9H9Y4 310 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 FGF22Q9HCT0 170 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 MAN2C1Q9NTJ4 1040 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 NLGN3Q9NZ94 848 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 THEGQ9P2T0 379 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 GNG12Q9UBI6 72 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 PURGQ9UJV8 347 aaKnown RBP3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 RNF215Q9Y6U7 377 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 CCDC88BA6NC98 1476 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 TEX14Q8IWB6 1497 aa3.77□□□□□ -1.81
HMGB1P48-201ENST00000446155 AFF2P51816 1311 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 PPRC1Q5VV67 1664 aaKnown RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 HEATR9A2RTY3 570 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 OR5H15A6NDH6 313 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 SNTNA6NMZ2 147 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 A8MU76 341 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 WRBO00258 174 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 TIMM8AO60220 97 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 TOXO94900 526 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ECDO95905 644 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 OPN1LWP04000 364 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 FHP07954 510 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ALPIP09923 528 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 STAG3L3P0CL85 134 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 MAGEA5P43359 124 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 MAGEA8P43361 318 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ITPK1Q13572 414 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ENPP2Q13822 863 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 SLC17A1Q14916 467 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CHI3L2Q15782 390 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 TMEM44Q2T9K0 475 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 GGTA1PQ4G0N0 100 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CTSL3PQ5NE16 218 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CELF3Q5SZQ8 465 aaKnown RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ATL3Q6DD88 541 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 RHBDD2Q6NTF9 364 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 PWWP2BQ6NUJ5 590 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 BHLHB9Q6PI77 547 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ANKRD37Q7Z713 158 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 PAQR7Q86WK9 346 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 TMEM17Q86X19 198 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 LACC1Q8IV20 430 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 LSMEM2Q8N112 164 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CLDN19Q8N6F1 224 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 TMEM178AQ8NBL3 297 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CHDHQ8NE62 594 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 RPLP0P6Q8NHW5 317 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 SLC22A8Q8TCC7 542 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 FBXO25Q8TCJ0 367 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ELMO2Q96JJ3 720 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CPXM1Q96SM3 734 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 PINK1Q9BXM7 581 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 WDR13Q9H1Z4 485 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 PNNQ9H307 717 aaKnown RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 ZFP14Q9HCL3 533 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 NRN1Q9NPD7 142 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 TEX10Q9NXF1 929 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 HOXC10Q9NYD6 342 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 MBD2Q9UBB5 411 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 CACNG5Q9UF02 275 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 SLC9A8Q9Y2E8 581 aa3.76□□□□□ -1.81
HMGB1P48-201ENST00000446155 A0A0J9YVX5 310 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 LRIT2A6NDA9 550 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 TMCO5BA8MYB1 307 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 TCP11X1B4DZS4 312 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 PES1O00541 588 aaKnown RBP3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 SURF4O15260 269 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 NBR2O15453 112 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 DNAJB6O75190 326 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 TSPAN12O95859 305 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 POLR2MP0CAP2 368 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 NCK1P16333 377 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 TBXA2RP21731 343 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 SYKP43405 635 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 OR1G1P47890 313 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 ZFP36L2P47974 494 aaKnown RBP3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 LEPRP48357 1165 aaKnown RBP3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 CASP4P49662 377 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 PGFP49763 221 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 XGP55808 180 aa3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 EWSR1Q01844 656 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P48-201ENST00000446155 RBBP4Q09028 425 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms