RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 ZCCHC12Q6PEW1 402 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 RRM2BQ7LG56 351 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 NKAIN4Q8IVV8 208 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF619Q8N2I2 560 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 CLDN22Q8N7P3 220 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 KLHL25Q9H0H3 589 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 DUSP22Q9NRW4 184 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 IL20Q9NYY1 176 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 STUB1Q9UNE7 303 aa13.19□□□□□ -0.3
NCLP1-201ENST00000445357 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 HYKKA2RU49 373 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 KRBA1A5PL33 1030 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 SHISA7A6NL88 538 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 CYR61O00622 381 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 FGF17O60258 216 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 GALR3O60755 368 aaPredicted RBP13.18□□□□□ -0.3
NCLP1-201ENST00000445357 GPR75O95800 540 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 SOX3P41225 446 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 CRYBB2P43320 205 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 CD97P48960 835 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF136P52737 540 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 EIF2B5Q13144 721 aaKnown RBP13.18□□□□□ -0.3
NCLP1-201ENST00000445357 TMEM44Q2T9K0 475 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 TRMT12Q53H54 448 aaKnown RBP13.18□□□□□ -0.3
NCLP1-201ENST00000445357 PAQR6Q6TCH4 344 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
NCLP1-201ENST00000445357 OR9Q1Q8NGQ5 310 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 SLC37A2Q8TED4 501 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 HMGB4Q8WW32 186 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 OSTF1Q92882 214 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 STACQ99469 402 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 TCEAL2Q9H3H9 227 aaPredicted RBP13.18□□□□□ -0.3
NCLP1-201ENST00000445357 HRASLS2Q9NWW9 162 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 NTNG1Q9Y2I2 539 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ETV5P41161 510 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 MAP3K8P41279 467 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ETV1P50549 477 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 HOXC5Q00444 222 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 KIAA0895LQ68EN5 471 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 PRSS41Q7RTY9 318 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 LYSMD2Q8IV50 215 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 PHC2Q8IXK0 858 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 CA13Q8N1Q1 262 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 CDRT4Q8N9R6 151 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 TMEM52Q8NDY8 209 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ANKK1Q8NFD2 765 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 NEURL2Q9BR09 285 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ASPNQ9BXN1 380 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ISYNA1Q9NPH2 558 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 MED17Q9NVC6 651 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 DOLKQ9UPQ8 538 aa13.18□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF670-ZNF695F2Z2N8 137 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 STX11O75558 287 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 NTN1O95631 604 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 AK1P00568 194 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 GLULP15104 373 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 GNSP15586 552 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 CPEP16870 476 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 MYL12AP19105 171 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 ID2Q02363 134 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 MGAT2Q10469 447 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 PRICKLE4Q2TBC4 344 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 DCST2Q5T1A1 773 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 ZNF620Q6ZNG0 422 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 CCDC190Q86UF4 302 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 SLC44A3Q8N4M1 653 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 CSNK1A1LQ8N752 337 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 PMM1Q92871 262 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 RNFT2Q96EX2 444 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 NUAK2Q9H093 628 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 SP140LQ9H930 580 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 ADAP2Q9NPF8 381 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 MAT2BQ9NZL9 334 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
NCLP1-201ENST00000445357 EXOSC1Q9Y3B2 195 aaKnown RBP13.17□□□□□ -0.3
NCLP1-201ENST00000445357 CDH10Q9Y6N8 788 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 TMEM131Q92545 1883 aa13.17□□□□□ -0.3
NCLP1-201ENST00000445357 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SPTY2D1-AS1A0A0U1RR47 76 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 PNMA8CA0A1B0GUJ8 204 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 OR5K3A6NET4 321 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 LDB3O75112 727 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SNX4O95219 450 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 MED26O95402 600 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 EIF2S1P05198 315 aaKnown RBP13.16□□□□□ -0.3
NCLP1-201ENST00000445357 MTNR1AP48039 350 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 WNT4P56705 351 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 SHC2P98077 582 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 BNC1Q01954 994 aa13.16□□□□□ -0.3
NCLP1-201ENST00000445357 CDC20Q12834 499 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms