RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MISPQ8IVT2 679 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 FAM109AQ8N4B1 249 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 ANKS4BQ8N8V4 417 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 OR52N2Q8NGI0 321 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 ZFP90Q8TF47 636 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 TMEM41AQ96HV5 264 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 NODALQ96S42 347 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 SH3GL1Q99961 368 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 TTTY12Q9BZ98 90 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 NMUR2Q9GZQ4 415 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 LDAHQ9H6V9 325 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 PTGES2Q9H7Z7 377 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 POLE3Q9NRF9 147 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 DEPPQ9NTK1 212 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 GID8Q9NWU2 228 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 TUBA8Q9NY65 449 aaPredicted RBP12.92□□□□□ -0.34
SSBP3-208ENST00000444533 PPP4R1LQ9P1A2 415 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 P2RX2Q9UBL9 471 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 NPIPA1Q9UND3 350 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 WIF1Q9Y5W5 379 aa12.92□□□□□ -0.34
SSBP3-208ENST00000444533 FAM166BA8MTA8 275 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 NDUFB5O43674 189 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 SCO2O43819 266 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 CDC40O60508 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
SSBP3-208ENST00000444533 NPPAP01160 153 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 NGFRP08138 427 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 TBXA2RP21731 343 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 CASP6P55212 293 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 DSTNP60981 165 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 C17orf67Q0P5P2 114 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 SLC10A1Q14973 349 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 COQ5Q5HYK3 327 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 LRIF1Q5T3J3 769 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 CCNJQ5T5M9 372 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 GFRALQ6UXV0 394 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 DHDDSQ86SQ9 333 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 GALNT10Q86SR1 603 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 GHDCQ8N2G8 530 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 ZNF614Q8N883 585 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 CHDHQ8NE62 594 aaPredicted RBP12.91□□□□□ -0.34
SSBP3-208ENST00000444533 OR4K17Q8NGC6 315 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 RP9Q8TA86 221 aaKnown RBP12.91□□□□□ -0.34
SSBP3-208ENST00000444533 FAM110BQ8TC76 370 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 CMTM5Q96DZ9 223 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 TRIM4Q9C037 500 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 PAIP1Q9H074 479 aaKnown RBP12.91□□□□□ -0.34
SSBP3-208ENST00000444533 QPCTLQ9NXS2 382 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 FAM53CQ9NYF3 392 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 WDR45Q9Y484 360 aa12.91□□□□□ -0.34
SSBP3-208ENST00000444533 NUP214P35658 2090 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 LOC100653049A0A140TA62 436 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 ANKUB1A6NFN9 424 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 C5orf58C9J3I9 102 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 FAM47E-STBD1D6RA91 191 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 J3QKU1 62 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 GTPBP1O00178 669 aaKnown RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 GNB5O14775 395 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 TRIM3O75382 744 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 CBR3O75828 277 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 TRAPPC6AO75865 159 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 KRT34O76011 436 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 FAM107AO95990 144 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 ATP12AP54707 1039 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 GPR68Q15743 365 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 HYAL4Q2M3T9 481 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 GRAMD1BQ3KR37 738 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 PAGE3Q5JUK9 113 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 EXOSC6Q5RKV6 272 aaKnown RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 TIGD3Q6B0B8 471 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 SNX32Q86XE0 403 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 PLCZ1Q86YW0 608 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 DPP10Q8N608 796 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 ST6GALNAC3Q8NDV1 305 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 OIT3Q8WWZ8 545 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 RAB8BQ92930 207 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 MIB2Q96AX9 1013 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 ROPN1LQ96C74 230 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 GPR137Q96N19 417 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 LRRC37BQ96QE4 947 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 CCT8L2Q96SF2 557 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 SDF2Q99470 211 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 THUMPD3Q9BV44 507 aaKnown RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 TSPAN10Q9H1Z9 355 aaPredicted RBP12.9□□□□□ -0.34
SSBP3-208ENST00000444533 GALNT9Q9HCQ5 603 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 ARMCX1Q9P291 453 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 NTNG1Q9Y2I2 539 aa12.9□□□□□ -0.34
SSBP3-208ENST00000444533 A0A0G2JMM0 328 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 A0A1W2PPB8 328 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 A0A1W2PRS3 328 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 KIR3DP1A8MWS1 328 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 HMGN4O00479 90 aa12.89□□□□□ -0.35
SSBP3-208ENST00000444533 MRASO14807 208 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms