RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 C1orf109Q9NX04 203 aa19.01■□□□□ 0.63
VSX1-206ENST00000444511 NDRG3Q9UGV2 375 aa19.01■□□□□ 0.63
VSX1-206ENST00000444511 MID2Q9UJV3 735 aa19.01■□□□□ 0.63
VSX1-206ENST00000444511 CCL27Q9Y4X3 112 aa19.01■□□□□ 0.63
VSX1-206ENST00000444511 AKAP6Q13023 2319 aa19.01■□□□□ 0.63
VSX1-206ENST00000444511 ITPR3Q14573 2671 aa19■□□□□ 0.63
VSX1-206ENST00000444511 MTORP42345 2549 aa19■□□□□ 0.63
VSX1-206ENST00000444511 TTC36A6NLP5 189 aa19■□□□□ 0.63
VSX1-206ENST00000444511 LINC01387J3KSC0 135 aa19■□□□□ 0.63
VSX1-206ENST00000444511 MSTNO14793 375 aa19■□□□□ 0.63
VSX1-206ENST00000444511 CASKO14936 926 aa19■□□□□ 0.63
VSX1-206ENST00000444511 PDPK1O15530 556 aa19■□□□□ 0.63
VSX1-206ENST00000444511 KCNH1O95259 989 aa19■□□□□ 0.63
VSX1-206ENST00000444511 KRT4P19013 534 aa19■□□□□ 0.63
VSX1-206ENST00000444511 PRPH2P23942 346 aa19■□□□□ 0.63
VSX1-206ENST00000444511 GABRA3P34903 492 aa19■□□□□ 0.63
VSX1-206ENST00000444511 GPC1P35052 558 aa19■□□□□ 0.63
VSX1-206ENST00000444511 KIAA0040Q15053 153 aa19■□□□□ 0.63
VSX1-206ENST00000444511 POU4F3Q15319 338 aa19■□□□□ 0.63
VSX1-206ENST00000444511 ZNF551Q7Z340 670 aaPredicted RBP19■□□□□ 0.63
VSX1-206ENST00000444511 CNEP1R1Q8N9A8 125 aa19■□□□□ 0.63
VSX1-206ENST00000444511 EIF1ADQ8N9N8 165 aaKnown RBP19■□□□□ 0.63
VSX1-206ENST00000444511 RTN4RQ9BZR6 473 aa19■□□□□ 0.63
VSX1-206ENST00000444511 FIS1Q9Y3D6 152 aa19■□□□□ 0.63
VSX1-206ENST00000444511 ZNF337Q9Y3M9 751 aa19■□□□□ 0.63
VSX1-206ENST00000444511 PTGDR2Q9Y5Y4 395 aa19■□□□□ 0.63
VSX1-206ENST00000444511 SETD2Q9BYW2 2564 aaPredicted RBP18.99■□□□□ 0.63
VSX1-206ENST00000444511 AZIN1O14977 448 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 SEC14L5O43304 696 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 ATE1O95260 518 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 UTS2O95399 124 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 HRGP04196 525 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 IFI6P09912 130 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 PRPS2P11908 318 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 ANKRD26P1Q6NSI1 321 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 C4orf33Q8N1A6 199 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 OR5M1Q8NGP8 315 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 ZFP28Q8NHY6 868 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 EPS8L3Q8TE67 593 aaKnown RBP18.99■□□□□ 0.63
VSX1-206ENST00000444511 C1GALT1C1Q96EU7 318 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 PIGQQ9BRB3 760 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 IQCGQ9H095 443 aaKnown RBP18.99■□□□□ 0.63
VSX1-206ENST00000444511 PLEKHF2Q9H8W4 249 aa18.99■□□□□ 0.63
VSX1-206ENST00000444511 PRRC2AP48634 2157 aaKnown RBP18.99■□□□□ 0.63
VSX1-206ENST00000444511 OR2M5A3KFT3 312 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 NPIPB8E9PQR5 432 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 H3BML4 177 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 TNFRSF21O75509 655 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 CHEK2O96017 543 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 NEFHP12036 1026 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 C17orf67Q0P5P2 114 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 DEFB113Q30KQ7 82 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 VPS26BQ4G0F5 336 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 C10orf107Q8IVU9 208 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 LRRN4CLQ8ND94 238 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 GPR151Q8TDV0 419 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 FIG4Q92562 907 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 PIK3R3Q92569 461 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 CIDECQ96AQ7 238 aaPredicted RBP18.98■□□□□ 0.63
VSX1-206ENST00000444511 PPCDCQ96CD2 204 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 STARD4Q96DR4 205 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 CCT7Q99832 543 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 PINK1Q9BXM7 581 aa18.98■□□□□ 0.63
VSX1-206ENST00000444511 EIF3LQ9Y262 564 aaKnown RBP18.98■□□□□ 0.63
VSX1-206ENST00000444511 GXYLT2A0PJZ3 443 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 H0YC42 278 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 AKAP10O43572 662 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 GMFGO60234 142 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 ANGPTL1O95841 491 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 SUCLG1P53597 346 aaKnown RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 PRKAG1P54619 331 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 TPD52P55327 224 aaPredicted RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 CLDN15P56746 228 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 SIRPAP78324 504 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 FOXD4Q12950 439 aaPredicted RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 GLYR1Q49A26 553 aaPredicted RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 VWA1Q6PCB0 445 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 SZRD1Q7Z422 152 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 CEP70Q8NHQ1 597 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 SMPDL3BQ92485 455 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 ZBED6CLQ96FA7 236 aaPredicted RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 PGM2Q96G03 612 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 ZNF764Q96H86 408 aaPredicted RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 TSSK3Q96PN8 268 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 FAM111AQ96PZ2 611 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 TRMOQ9BU70 441 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 REEP4Q9H6H4 257 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 SH3BP4Q9P0V3 963 aa18.97■□□□□ 0.63
VSX1-206ENST00000444511 HRNRQ86YZ3 2850 aaPredicted RBP18.97■□□□□ 0.63
VSX1-206ENST00000444511 IGKV1D-16P01601 117 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 LINC00032P0C843 101 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 SDC1P18827 310 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 MANFP55145 182 aaKnown RBP18.96■□□□□ 0.63
VSX1-206ENST00000444511 CLDN20P56880 219 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 RPS3AP61247 264 aaKnown RBP18.96■□□□□ 0.63
VSX1-206ENST00000444511 RPL38P63173 70 aaKnown RBP18.96■□□□□ 0.63
VSX1-206ENST00000444511 PRR5P85299 388 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 FAM27E3Q08E93 113 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 PCLAFQ15004 111 aa18.96■□□□□ 0.63
VSX1-206ENST00000444511 GRAMD1BQ3KR37 738 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms