RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 STEAP2Q8NFT2 490 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 OR7G2Q8NG99 324 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 OR9A2Q8NGT5 310 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 DUSP19Q8WTR2 217 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 GTPBP3Q969Y2 492 aaKnown RBP12.85□□□□□ -0.35
HMGN1-208ENST00000443046 ATP6V1E2Q96A05 226 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 S100PBPQ96BU1 408 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 NSUN5Q96P11 429 aaKnown RBP12.85□□□□□ -0.35
HMGN1-208ENST00000443046 FAIM2Q9BWQ8 316 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 BRF2Q9HAW0 419 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 GLRX2Q9NS18 164 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 PCTPQ9UKL6 214 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 SLC12A4Q9UP95 1085 aa12.85□□□□□ -0.35
HMGN1-208ENST00000443046 PLCE1Q9P212 2302 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 PDYNP01213 254 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 ALDH9A1P49189 494 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 CTBP2P56545 445 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 ERCC6LQ2NKX8 1250 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 CYP27C1Q4G0S4 372 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 TTC19Q6DKK2 380 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-208ENST00000443046 MFSD12Q6NUT3 480 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 GABRG1Q8N1C3 465 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 OR10H5Q8NGA6 315 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 OR10D3Q8NH80 312 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 TRAF4Q9BUZ4 470 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-208ENST00000443046 HDHD5Q9BXW7 423 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 FAM120CQ9NX05 1096 aaKnown RBP12.84□□□□□ -0.35
HMGN1-208ENST00000443046 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-208ENST00000443046 TAS2R9Q9NYW1 312 aa12.84□□□□□ -0.35
HMGN1-208ENST00000443046 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
HMGN1-208ENST00000443046 GDF2Q9UK05 429 aaPredicted RBP12.84□□□□□ -0.35
HMGN1-208ENST00000443046 TENM1Q9UKZ4 2725 aa12.83□□□□□ -0.35
HMGN1-208ENST00000443046 SHISA8B8ZZ34 492 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 STX16-NPEPL1H3BU86 382 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 CCDC188H7C350 402 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 EIF1AYO14602 144 aaKnown RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 STX16O14662 325 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 CLOCKO15516 846 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 PLGP00747 810 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 CD3EP07766 207 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 ZNF17P17021 662 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 ADH6P28332 368 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 EIF1AXP47813 144 aaKnown RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 SGO1Q5FBB7 561 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 TECRLQ5HYJ1 363 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 MARCH3Q86UD3 253 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 DTX2Q86UW9 622 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 STK32CQ86UX6 486 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 SAMD14Q8IZD0 417 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 C1orf52Q8N6N3 182 aaKnown RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 PTGR2Q8N8N7 351 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 OR4F6Q8NGB9 312 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 MTBPQ96DY7 904 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 HBEGFQ99075 208 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 TACO1Q9BSH4 297 aaKnown RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 PRRG4Q9BZD6 226 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 TRIM2Q9C040 744 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 ELOVL6Q9H5J4 265 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 ESRP2Q9H6T0 727 aaKnown RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 BARX1Q9HBU1 254 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-208ENST00000443046 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
HMGN1-208ENST00000443046 IGHV4-30-2A0A087WSY4 118 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 A0A1W2PP18 115 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 PPP6CO00743 305 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 PSMG1O95456 288 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 IL33O95760 270 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 PSMA4P25789 261 aaKnown RBP12.82□□□□□ -0.36
HMGN1-208ENST00000443046 AGTR1P30556 359 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 ARL1P40616 181 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-208ENST00000443046 VLDLRP98155 873 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 STX5Q13190 355 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 NAB1Q13506 487 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 TAB1Q15750 504 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 TMEM249Q2WGJ8 235 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 MROH9Q5TGP6 573 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 LETMD1Q6P1Q0 360 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 APOOLQ6UXV4 268 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 GALNT10Q86SR1 603 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 FBF1Q8TES7 1133 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 HSD17B8Q92506 261 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 PHF21BQ96EK2 531 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 TNFRSF13CQ96RJ3 184 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 C19orf24Q9BVV8 132 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 GRHL1Q9NZI5 618 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 STOML1Q9UBI4 398 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 MCM8Q9UJA3 840 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 ZNF225Q9UK10 706 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 MCTS1Q9ULC4 181 aaKnown RBP12.82□□□□□ -0.36
HMGN1-208ENST00000443046 SNX8Q9Y5X2 465 aa12.82□□□□□ -0.36
HMGN1-208ENST00000443046 MALRD1Q5VYJ5 2156 aa12.81□□□□□ -0.36
HMGN1-208ENST00000443046 MEGF8Q7Z7M0 2845 aa12.81□□□□□ -0.36
HMGN1-208ENST00000443046 A0A087WV62 115 aa12.81□□□□□ -0.36
HMGN1-208ENST00000443046 A0A096LPK6 155 aa12.81□□□□□ -0.36
HMGN1-208ENST00000443046 DPRXA6NFQ7 191 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms