RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 C15orf38-AP3S2A0A0A6YYH1 394 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 RRP9O43818 475 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 HCN1O60741 890 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 SNX4O95219 450 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CLPSP04118 112 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 IL3P08700 152 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 NCF2P19878 526 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 ABCD3P28288 659 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 KIR3DL1P43629 444 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 TRPC1P48995 793 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 MRPS35P82673 323 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 EXOSC7Q15024 291 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 GSTA3Q16772 222 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 PRICKLE4Q2TBC4 344 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 C6orf136Q5SQH8 315 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 BICRALQ6AI39 1079 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CCDC116Q8IYX3 515 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 OR2T11Q8NH01 316 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 EXOSC8Q96B26 276 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 LRRC37BQ96QE4 947 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 NXF5Q9H1B4 397 aaKnown RBP8.03□□□□□ -1.12
USP6NL-203ENST00000443016 METTL7AQ9H8H3 244 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 DCAF16Q9NXF7 216 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 CES1P1Q9UKY3 287 aa8.03□□□□□ -1.12
USP6NL-203ENST00000443016 ANKHD1Q8IWZ3 2542 aaKnown RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 WDR1O75083 606 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 PRPS2P11908 318 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 DRD2P14416 443 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 GPX3P22352 226 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 GSTM5P46439 218 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 EMX2Q04743 252 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 MAP4K2Q12851 820 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 SQLEQ14534 574 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 MEX3BQ6ZN04 569 aaKnown RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 Q6ZSR9 355 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ZNF441Q8N8Z8 693 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 C17orf47Q8NEP4 570 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 OR52R1Q8NGF1 315 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 LILRB4Q8NHJ6 448 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ADIPOR1Q96A54 375 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 CNRIP1Q96F85 164 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 UCK2Q9BZX2 261 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 SLC6A15Q9H2J7 730 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 RASSF1Q9NS23 344 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 QPCTLQ9NXS2 382 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ASIC5Q9NY37 505 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 MAT2BQ9NZL9 334 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 EHD3Q9NZN3 535 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 PRODH2Q9UF12 536 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 CNOT11Q9UKZ1 510 aaKnown RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 DTX4Q9Y2E6 619 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 POLR3HQ9Y535 204 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ANKRD17O75179 2603 aaKnown RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 NKX2-6A6NCS4 301 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 LRRC3CA6NJW4 275 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 FAM47E-STBD1D6RA91 191 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 SLC22A2O15244 555 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ANXA4P09525 319 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 GABRA1P14867 456 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 TIA1P31483 386 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ASMTP46597 345 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ATP4BP51164 291 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 NUP107P57740 925 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 LTB4RQ15722 352 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 TRMT12Q53H54 448 aaKnown RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 APIPQ96GX9 242 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 LCORQ96JN0 433 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 GNRHR2Q96P88 292 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 SECISBP2Q96T21 854 aaKnown RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ZBTB18Q99592 522 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 TTYH2Q9BSA4 534 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 C1orf50Q9BV19 199 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 EBPLQ9BY08 206 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ITPAQ9BY32 194 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 PROK2Q9HC23 129 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ACKR4Q9NPB9 350 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 KLRF1Q9NZS2 232 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.02□□□□□ -1.13
USP6NL-203ENST00000443016 CCL27Q9Y4X3 112 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 CAPN7Q9Y6W3 813 aa8.02□□□□□ -1.13
USP6NL-203ENST00000443016 PPM1BO75688 479 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 DDX5P17844 614 aaKnown RBP8.01□□□□□ -1.13
USP6NL-203ENST00000443016 S1PR1P21453 382 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 ADSLP30566 484 aaPredicted RBP8.01□□□□□ -1.13
USP6NL-203ENST00000443016 SSTR2P30874 369 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 MPIP34949 423 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 CASP3P42574 277 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 ZFP36L2P47974 494 aaKnown RBP8.01□□□□□ -1.13
USP6NL-203ENST00000443016 DCAF7P61962 342 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 DUSP8Q13202 625 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 MAPRE2Q15555 327 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 IL23RQ5VWK5 629 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 MIER2Q8N344 545 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 NEIL3Q8TAT5 605 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 SPPL2AQ8TCT8 520 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 HSPBAP1Q96EW2 488 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 BBS4Q96RK4 519 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 MIEF1Q9NQG6 463 aa8.01□□□□□ -1.13
USP6NL-203ENST00000443016 AIG1Q9NVV5 245 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms