RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SERTAD3Q9UJW9 196 aa4.42□□□□□ -1.7
PTPN4-206ENST00000441089 FBXL4Q9UKA2 621 aa4.42□□□□□ -1.7
PTPN4-206ENST00000441089 RUVBL1Q9Y265 456 aaKnown RBP4.42□□□□□ -1.7
PTPN4-206ENST00000441089 TMED5Q9Y3A6 229 aa4.42□□□□□ -1.7
PTPN4-206ENST00000441089 L3MBTL1Q9Y468 752 aa4.42□□□□□ -1.7
PTPN4-206ENST00000441089 CADP27708 2225 aa4.42□□□□□ -1.7
PTPN4-206ENST00000441089 SNRNP200O75643 2136 aaKnown RBP4.42□□□□□ -1.7
PTPN4-206ENST00000441089 LOC100653049A0A140TA62 436 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 A6NNC1 897 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 WASHC1A8K0Z3 465 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ANKRD65E5RJM6 399 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 FXYD1O00168 92 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 NR5A2O00482 541 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ADAM10O14672 748 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 SLC22A2O15244 555 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ERI3O43414 337 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 AKAP10O43572 662 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 FOXS1O43638 330 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 SCN2BO60939 215 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PRKRAO75569 313 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 SLC22A3O75751 556 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 CYP7B1O75881 506 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 KRT34O76011 436 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 SCELO95171 688 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 LRATO95237 230 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 EIF2S1P05198 315 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TPOP07202 933 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ANXA4P09525 319 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PIM1P11309 404 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PRPS2P11908 318 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 JAK1P23458 1154 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 MMP11P24347 488 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ATP5A1P25705 553 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 CERS1P27544 350 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 GSTM2P28161 218 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 GRK3P35626 688 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 KIR2DL3P43628 341 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RAP1GDS1P52306 607 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 HNRNPH2P55795 449 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 WNT3P56703 355 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 VSX2P58304 361 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 C21orf58P58505 322 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TAS2R50P59544 299 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 STX1BP61266 288 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 BTN3A2P78410 334 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PHEXP78562 749 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 MAD2L1Q13257 205 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PDE7AQ13946 482 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RUNX2Q13950 521 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RCAN2Q14206 197 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 MPEG1Q2M385 716 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 VPS26BQ4G0F5 336 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TMEM35AQ53FP2 167 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ZC3H12BQ5HYM0 836 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PAGE3Q5JUK9 113 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 SPANXN4Q5MJ08 99 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 WASHC2DQ5SRD0 308 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 HIST2H2BDQ6DRA6 164 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 OR4C11Q6IEV9 310 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 FAM71E1Q6IPT2 247 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ANKRD26P1Q6NSI1 321 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TEPPQ6URK8 271 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RINLQ6ZS11 566 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ASRGL1Q7L266 308 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PDSS2Q86YH6 399 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 DOLPP1Q86YN1 238 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 HIPK1Q86Z02 1210 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RIMKLAQ8IXN7 391 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ULK2Q8IYT8 1036 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 LRRC75A-AS1Q8N1F1 130 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 GHDCQ8N2G8 530 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 MIER2Q8N344 545 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 OR7A2PQ8NGA2 310 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 OR1L3Q8NH93 324 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RP9Q8TA86 221 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 C16orf78Q8WTQ4 265 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RND1Q92730 232 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 GFM2Q969S9 779 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 VPS33AQ96AX1 596 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TM4SF18Q96CE8 201 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 RCN3Q96D15 328 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 NSL1Q96IY1 281 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 METTL2AQ96IZ6 378 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 Q96MF0 132 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 NPAS2Q99743 824 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 C19orf24Q9BVV8 132 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PLA2G12AQ9BZM1 189 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 DDX31Q9H8H2 851 aaKnown RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PFDN4Q9NQP4 134 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TEX10Q9NXF1 929 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ZIM2Q9NZV7 527 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 IFT80Q9P2H3 777 aaPredicted RBP4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ATP6V1HQ9UI12 483 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 TAGLN3Q9UI15 199 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 MCM8Q9UJA3 840 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 PLCL2Q9UPR0 1127 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 ERVK-11Q9UQG0 969 aa4.41□□□□□ -1.7
PTPN4-206ENST00000441089 EIF3LQ9Y262 564 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms