RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 NPIPA5E9PKD4 350 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 PCDHGA12O60330 932 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 PRAF2O60831 178 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 LAMP1P11279 417 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ADH5P11766 374 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GKP32189 559 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 RGS6P49758 472 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZNF140P52738 457 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 GP2P55259 537 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 ACTR1AP61163 376 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 RPS13P62277 151 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 CRHR2Q13324 411 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TBCEQ15813 527 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 CTU2Q2VPK5 515 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 BCL7AQ4VC05 210 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 CLEC12AQ5QGZ9 265 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 SYT6Q5T7P8 510 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 SLC8B1Q6J4K2 584 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 C3P1Q6ZMU1 363 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZNF627Q7L945 461 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 KIF18BQ86Y91 864 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZCCHC10Q8TBK6 192 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 POF1BQ8WVV4 589 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 YIPF5Q969M3 257 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 MCHR1Q99705 422 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TMED9Q9BVK6 235 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 METTL8Q9H825 291 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 SLC28A3Q9HAS3 691 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 NPIPA1Q9UND3 350 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TCRBV5S2A0A599 114 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 C1orf226A1L170 272 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TCAPO15273 167 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 EMC8O43402 210 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZNF821O75541 412 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 VNN2O95498 520 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 HOXB3P14651 431 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 GNSP15586 552 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZNF250P15622 560 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 S1PR1P21453 382 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 AHCYP23526 432 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GGT2P36268 569 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 EIF2S3P41091 472 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 RPL34P49207 117 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 GSK3AP49840 483 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 DAPP51397 102 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 AQP6Q13520 282 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 FGL2Q14314 439 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GINS1Q14691 196 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ALG10Q5BKT4 473 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TOR1AIP1Q5JTV8 583 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 C9orf152Q5JTZ5 239 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 THEM4Q5T1C6 240 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 C22orf42Q6IC83 251 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 DLEU7Q6UYE1 221 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 SPATC1Q76KD6 591 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 LYSMD2Q8IV50 215 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 HDDC3Q8N4P3 179 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 FAM83FQ8NEG4 500 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 OR4K14Q8NGD5 310 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 OR2L2Q8NH16 312 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 SLC7A13Q8TCU3 470 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 NUDT8Q8WV74 236 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TXNDC15Q96J42 360 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GAL3ST4Q96RP7 486 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 URM1Q9BTM9 101 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 SORBS1Q9BX66 1292 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 MMP28Q9H239 520 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 DPEP2Q9H4A9 486 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 CLMPQ9H6B4 373 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 KLHL21Q9UJP4 597 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 DLGAP4Q9Y2H0 992 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 NOP16Q9Y3C1 178 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 PRRC2BQ5JSZ5 2229 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 MBLAC1A4D2B0 266 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 TMEM88BA6NKF7 163 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 M0R129 80 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GPR39O43194 453 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ETFAP13804 333 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 SDC1P18827 310 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 CNR2P34972 360 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 RBMXP38159 391 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 P2RY4P51582 365 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ACTBP60709 375 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ACTG1P63261 375 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZXDBP98169 803 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GRK1Q15835 563 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 EOGTQ5NDL2 527 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 SAPCD1Q5SSQ6 148 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ATAD3CQ5T2N8 411 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 LIPNQ5VXI9 398 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ANKRD34AQ69YU3 496 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 Q6ZPB1 254 aaPredicted RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 GALNTL5Q7Z4T8 443 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 RBM23Q86U06 439 aaKnown RBP6.03□□□□□ -1.44
BDNF-211ENST00000439476 SERPINA11Q86U17 422 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 GPAT4Q86UL3 456 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 ZNF280BQ86YH2 543 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 Q8N402 240 aa6.03□□□□□ -1.44
BDNF-211ENST00000439476 TMEM151AQ8N4L1 468 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms