RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 PTNP21246 168 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 RFX3P48380 749 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 MRPS22P82650 360 aaKnown RBP13.24□□□□□ -0.29
HDAC8-213ENST00000436675 ACAP2Q15057 778 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 BEND4Q6ZU67 534 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 MILR1Q7Z6M3 343 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 ATG4DQ86TL0 474 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-213ENST00000436675 GGNQ86UU5 652 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 CCDC25Q86WR0 208 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 OR4F6Q8NGB9 312 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF675Q8TD23 568 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 FBF1Q8TES7 1133 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 S100PBPQ96BU1 408 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 MTBPQ96DY7 904 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 GMPPAQ96IJ6 420 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-213ENST00000436675 HS6ST2Q96MM7 605 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 SDHAF3Q9NRP4 125 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 RNF14Q9UBS8 474 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 VDAC3Q9Y277 283 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 AP4B1Q9Y6B7 739 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 LINC01387J3KSC0 135 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 SSX4O60224 188 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 SS18L1O75177 396 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-213ENST00000436675 KLHL2O95198 593 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 IL3P08700 152 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 CALCOCO2Q13137 446 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 GANABQ14697 944 aaKnown RBP13.23□□□□□ -0.29
HDAC8-213ENST00000436675 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
HDAC8-213ENST00000436675 KLC3Q6P597 504 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 CYS1Q717R9 158 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 CREG2Q8IUH2 290 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 OR7G2Q8NG99 324 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 OR10D3Q8NH80 312 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 SELENOMQ8WWX9 145 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 GPR78Q96P69 363 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 VPS11Q9H270 941 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 SENP1Q9P0U3 644 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 PCTPQ9UKL6 214 aa13.23□□□□□ -0.29
HDAC8-213ENST00000436675 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 A0A096LPK6 155 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 PPP6CO00743 305 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC8-213ENST00000436675 CXCL13O43927 109 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 SYNGR4O95473 234 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 GSTA2P09210 222 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 UAP1Q16222 522 aaPredicted RBP13.22□□□□□ -0.29
HDAC8-213ENST00000436675 TECRLQ5HYJ1 363 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 NCMAPQ5T1S8 102 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 C6orf52Q5T4I8 152 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 MFSD12Q6NUT3 480 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 ADAM5Q6NVV9 412 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 STK32CQ86UX6 486 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
HDAC8-213ENST00000436675 KCNK17Q96T54 332 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 NPAS1Q99742 590 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 MCTS1Q9ULC4 181 aaKnown RBP13.22□□□□□ -0.29
HDAC8-213ENST00000436675 PLCE1Q9P212 2302 aa13.22□□□□□ -0.29
HDAC8-213ENST00000436675 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 HMX2A2RU54 273 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 TNFSF11O14788 317 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 PSMB1P20618 241 aaKnown RBP13.21□□□□□ -0.29
HDAC8-213ENST00000436675 IL11P20809 199 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 PSG6Q00889 435 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-213ENST00000436675 TCHHL1Q5QJ38 904 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-213ENST00000436675 LETMD1Q6P1Q0 360 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 DNM1P46Q6ZS02 220 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 GALNT10Q86SR1 603 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 STEAP2Q8NFT2 490 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 SLC9A6Q92581 669 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 C19orf24Q9BVV8 132 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 ESRP2Q9H6T0 727 aaKnown RBP13.21□□□□□ -0.29
HDAC8-213ENST00000436675 TMEM185BQ9H7F4 350 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 FBXO34Q9NWN3 711 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 TAS2R9Q9NYW1 312 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 XPR1Q9UBH6 696 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 ABCG2Q9UNQ0 655 aa13.21□□□□□ -0.29
HDAC8-213ENST00000436675 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 CCDC188H7C350 402 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 CHN1P15882 459 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 IL32P24001 234 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 TYK2P29597 1187 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 AGTR1P30556 359 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 STX2P32856 288 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 CLK3P49761 638 aaKnown RBP13.2□□□□□ -0.3
HDAC8-213ENST00000436675 CDH13P55290 713 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 TRA2BP62995 288 aaKnown RBP13.2□□□□□ -0.3
HDAC8-213ENST00000436675 BSPH1Q075Z2 132 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 TAB1Q15750 504 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 DECR1Q16698 335 aa13.2□□□□□ -0.3
HDAC8-213ENST00000436675 GLYR1Q49A26 553 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-213ENST00000436675 METTL2BQ6P1Q9 378 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms