RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 JSRP1Q96MG2 331 aaPredicted RBP16.77■□□□□ 0.28
HLA-F-220ENST00000434407 SERHL2Q9H4I8 314 aa16.77■□□□□ 0.28
HLA-F-220ENST00000434407 TMEM45AQ9NWC5 275 aa16.77■□□□□ 0.28
HLA-F-220ENST00000434407 FLRT3Q9NZU0 649 aa16.77■□□□□ 0.28
HLA-F-220ENST00000434407 B4GALT7Q9UBV7 327 aa16.77■□□□□ 0.28
HLA-F-220ENST00000434407 HRH3Q9Y5N1 445 aa16.77■□□□□ 0.28
HLA-F-220ENST00000434407 LIPGQ9Y5X9 500 aa16.77■□□□□ 0.28
HLA-F-220ENST00000434407 RNF103-CHMP3A0A140T963 221 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 FAM234BA2RU67 622 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 B4DXG7 233 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 CDC40O60508 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
HLA-F-220ENST00000434407 PDE9AO76083 593 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 UTS2O95399 124 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 CPSF4O95639 269 aaKnown RBP16.76■□□□□ 0.27
HLA-F-220ENST00000434407 HPNP05981 417 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 SOAT1P35610 550 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 POLR2JP52435 117 aaKnown RBP16.76■□□□□ 0.27
HLA-F-220ENST00000434407 POU6F2P78424 691 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-220ENST00000434407 GUCY1A3Q02108 690 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 ANGPTL8Q6UXH0 198 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 ZAR1Q86SH2 424 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 FUNDC1Q8IVP5 155 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 CLEC4FQ8N1N0 589 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 RFWD2Q8NHY2 731 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 ADAMTS15Q8TE58 950 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 JADE3Q92613 823 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 CDS1Q92903 461 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 OTUB1Q96FW1 271 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-220ENST00000434407 OR7D2Q96RA2 312 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 INPP5KQ9BT40 448 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 NPHS2Q9NP85 383 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 FBXO34Q9NWN3 711 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 KCNE3Q9Y6H6 103 aa16.76■□□□□ 0.27
HLA-F-220ENST00000434407 A0A1B0GUH1 482 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 C2orf72A6NCS6 295 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 OR14I1A6ND48 311 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 AQP7O14520 342 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 GNB5O14775 395 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 ZNHIT1O43257 154 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 CBR3O75828 277 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 MATN1P21941 496 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 PTGS2P35354 604 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 CDKN2CP42773 168 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 C3AR1Q16581 482 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 GRAMD1BQ3KR37 738 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 C1QL3Q5VWW1 255 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 AP1ARQ63HQ0 302 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 APOOLQ6UXV4 268 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 PLCZ1Q86YW0 608 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 NEIL3Q8TAT5 605 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 FAM57AQ8TBR7 257 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 THOC1Q96FV9 657 aaKnown RBP16.75■□□□□ 0.27
HLA-F-220ENST00000434407 SLC35G5Q96KT7 338 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 G6PC3Q9BUM1 346 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 RTN4RQ9BZR6 473 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 ZNF385DQ9H6B1 395 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 SLC52A3Q9NQ40 469 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 DCTN4Q9UJW0 460 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 PCDHGB3Q9Y5G1 929 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 HEATR5AQ86XA9 2040 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 HECTD1Q9ULT8 2610 aa16.75■□□□□ 0.27
HLA-F-220ENST00000434407 TRGV5A0A0B4J1U4 118 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 CCDC154A6NI56 674 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 DUXAA6NLW8 204 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 ALG1L2C9J202 215 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 LRRTM2O43300 516 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 AGFG2O95081 481 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 LDLRP01130 860 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 ZCCHC18P0CG32 403 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 ABOP16442 354 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 ENDOUP21128 410 aaKnown RBP16.74■□□□□ 0.27
HLA-F-220ENST00000434407 TBXA2RP21731 343 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 GDF1P27539 372 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 MDH1P40925 334 aaKnown RBP16.74■□□□□ 0.27
HLA-F-220ENST00000434407 STX1BP61266 288 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 RPS26P62854 115 aaKnown RBP16.74■□□□□ 0.27
HLA-F-220ENST00000434407 RCAN2Q14206 197 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 FIGNL1Q6PIW4 674 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 BLOC1S3Q6QNY0 202 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 DOLPP1Q86YN1 238 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 TRIML2Q8N7C3 387 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 FADS6Q8N9I5 356 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 CHDHQ8NE62 594 aaPredicted RBP16.74■□□□□ 0.27
HLA-F-220ENST00000434407 OR5D16Q8NGK9 328 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 OR4C3Q8NH37 302 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 PANX1Q96RD7 426 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 SLC35A5Q9BS91 424 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 FGFR1OP2Q9NVK5 253 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 TINAGQ9UJW2 476 aa16.74■□□□□ 0.27
HLA-F-220ENST00000434407 MRPS18CQ9Y3D5 142 aaKnown RBP16.74■□□□□ 0.27
HLA-F-220ENST00000434407 UTP20O75691 2785 aaKnown RBP16.73■□□□□ 0.27
HLA-F-220ENST00000434407 ARHGAP21Q5T5U3 1957 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 IGLV3-32A0A0A0MS00 114 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 TRGV8A0A0C4DH27 118 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 OXSR1O95747 527 aaPredicted RBP16.73■□□□□ 0.27
HLA-F-220ENST00000434407 RFX3P48380 749 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 SQLEQ14534 574 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 EMC4Q5J8M3 183 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 DCST2Q5T1A1 773 aa16.73■□□□□ 0.27
HLA-F-220ENST00000434407 CCNJQ5T5M9 372 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms