RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CDS1Q92903 461 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 IL20Q9NYY1 176 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 CALML5Q9NZT1 146 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 NDRG2Q9UN36 371 aaKnown RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 SLC17A4Q9Y2C5 497 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 TRDV1A0A1B0GX56 115 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 A0A1W2PQU0 124 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 SHISA3A0PJX4 238 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 CENPXA8MT69 81 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 FAM47E-STBD1D6RA91 191 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 CDC42EP2O14613 210 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 C5AR1P21730 350 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 STAT5AP42229 794 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 KIR2DL3P43628 341 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 ERVK-21P61565 698 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 STXBP1P61764 594 aaKnown RBP11.03□□□□□ -0.64
CD44-209ENST00000433892 CEBPEQ15744 281 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 DECR1Q16698 335 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
CD44-209ENST00000433892 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 CNIH2Q6PI25 160 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 ZNF620Q6ZNG0 422 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 ABI3BPQ7Z7G0 1075 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 NRROSQ86YC3 692 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 OR4N5Q8IXE1 308 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 ARIH2OSQ8N7S6 290 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 OR14C36Q8NHC7 312 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 DOK4Q8TEW6 326 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 SPRYD4Q8WW59 207 aaPredicted RBP11.03□□□□□ -0.64
CD44-209ENST00000433892 SECISBP2Q96T21 854 aaKnown RBP11.03□□□□□ -0.64
CD44-209ENST00000433892 ZNF649Q9BS31 505 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 TTYH2Q9BSA4 534 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 BEX2Q9BXY8 128 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 NUFIP1Q9UHK0 495 aaKnown RBP11.03□□□□□ -0.64
CD44-209ENST00000433892 SLC7A7Q9UM01 511 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 EYSQ5T1H1 3165 aa11.03□□□□□ -0.64
CD44-209ENST00000433892 A0A0B4J293 547 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 C2orf92A0A1B0GVN3 265 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 PRR19A6NJB7 356 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 BTN3A3O00478 584 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 SOCS6O14544 535 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 RGS13O14921 159 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 SEC14L5O43304 696 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 EML2O95834 649 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 POU2F2P09086 479 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 ZNF888P0CJ79 500 aaPredicted RBP11.02□□□□□ -0.64
CD44-209ENST00000433892 MYL9P24844 172 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 IGFALSP35858 605 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 RPS5P46782 204 aaKnown RBP11.02□□□□□ -0.64
CD44-209ENST00000433892 RNF144AP50876 292 aaPredicted RBP11.02□□□□□ -0.64
CD44-209ENST00000433892 RPS21P63220 83 aaKnown RBP11.02□□□□□ -0.64
CD44-209ENST00000433892 DSG2Q14126 1118 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 P2RY14Q15391 338 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 PGGHGQ32M88 737 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 FAM214AQ32MH5 1076 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 ZNF425Q6IV72 752 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 MBOAT2Q6ZWT7 520 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 MTSS1LQ765P7 747 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 VN1R4Q7Z5H5 301 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 MARCH9Q86YJ5 346 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 TRIM48Q8IWZ4 208 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 GALNT12Q8IXK2 581 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 RDH10Q8IZV5 341 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 VWA5B2Q8N398 1253 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 Q8N402 240 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 NEIL3Q8TAT5 605 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 UBASH3BQ8TF42 649 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 NR4A3Q92570 626 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 RNF31Q96EP0 1072 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 SAMD8Q96LT4 415 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 SARGQ9BW04 601 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 TEX12Q9BXU0 123 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 SLC17A9Q9BYT1 436 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 SLC6A17Q9H1V8 727 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 ANKRD19PQ9H560 264 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 CBLCQ9ULV8 474 aa11.02□□□□□ -0.64
CD44-209ENST00000433892 ZNF443Q9Y2A4 671 aaPredicted RBP11.02□□□□□ -0.64
CD44-209ENST00000433892 CD8B2A6NJW9 211 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 GABRPO00591 440 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 DVL2O14641 736 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 SLC31A1O15431 190 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 KLF4O43474 513 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 AKAP8O43823 692 aaKnown RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 ADH1BP00325 375 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 CD8BP10966 210 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 FUT1P19526 365 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 S100A1P23297 94 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 TSFMP43897 325 aaKnown RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 SEC13P55735 322 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 PPP3R1P63098 170 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 NDUFA5Q16718 116 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 CCNJQ5T5M9 372 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 HEPHL1Q6MZM0 1159 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 MFSD12Q6NUT3 480 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 GLCCI1Q86VQ1 547 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms