RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 ELAVL4P26378 380 aaKnown RBP18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 GAS1P54826 345 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 KLF10Q13118 480 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 UBAP2LQ14157 1087 aaKnown RBP18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 ARHGAP11BQ3KRB8 267 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 GTDC1Q4AE62 458 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 CCNJQ5T5M9 372 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 FNDC7Q5VTL7 733 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 TIGD3Q6B0B8 471 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 HEPHL1Q6MZM0 1159 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 TNFAIP8L2Q6P589 184 aaPredicted RBP18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 ZAR1Q86SH2 424 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 FAM109AQ8N4B1 249 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 TMEM251Q8N6I4 163 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 NMUR2Q9GZQ4 415 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 FAM107BQ9H098 131 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 ZNF703Q9H7S9 590 aaPredicted RBP18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 TPT1P8Q9HAU6 139 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 GALNT9Q9HCQ5 603 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 QPCTLQ9NXS2 382 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 FLRT3Q9NZU0 649 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 NDUFAF1Q9Y375 327 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 WIF1Q9Y5W5 379 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 GMEB1Q9Y692 573 aa18.36■□□□□ 0.53
CSNK1E-207ENST00000430335 FAM166BA8MTA8 275 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 NPIPA5E9PKD4 350 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 ADAM10O14672 748 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 CCDC22O60826 627 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 GUSBP08236 651 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 ATP6V1C1P21283 382 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 TBXA2RP21731 343 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 MASP1P48740 699 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 CLK3P49761 638 aaKnown RBP18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 MVDP53602 400 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 CASP9P55211 416 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 GRAMD1BQ3KR37 738 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 CMPK2Q5EBM0 449 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 ATAD3BQ5T9A4 648 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 AP1ARQ63HQ0 302 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 ANGPTL8Q6UXH0 198 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 DPP10Q8N608 796 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 XAGE5Q8WWM1 108 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 JSRP1Q96MG2 331 aaPredicted RBP18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 SDF2Q99470 211 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 HOXD1Q9GZZ0 328 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 UBQLN4Q9NRR5 601 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 FBXO34Q9NWN3 711 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 B4GALT7Q9UBV7 327 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 SEC14L3Q9UDX4 400 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 NPIPA1Q9UND3 350 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 RP1L1Q8IWN7 2480 aaPredicted RBP18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 EML6Q6ZMW3 1958 aa18.35■□□□□ 0.53
CSNK1E-207ENST00000430335 TRBV5-3A0A0A0MS03 114 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 ALG1L2C9J202 215 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 HMGN4O00479 90 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 ANGPT2O15123 496 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 WISP2O76076 250 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 RFPL3SP0C7P2 107 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 MAPRE2Q15555 327 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 GALNT10Q86SR1 603 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 MSRB3Q8IXL7 192 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 OR52N2Q8NGI0 321 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 OR1J4Q8NGS1 313 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 OR4C3Q8NH37 302 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 RAB8BQ92930 207 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 ZNF350Q9GZX5 532 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 TSPAN10Q9H1Z9 355 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 UBQLN3Q9H347 655 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 HHATLQ9HCP6 504 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 POLE3Q9NRF9 147 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 SDHAF3Q9NRP4 125 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 PLSCR2Q9NRY7 297 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 SLC25A37Q9NYZ2 338 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 SLAMF8Q9P0V8 285 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 C15orf41Q9Y2V0 281 aa18.34■□□□□ 0.53
CSNK1E-207ENST00000430335 ANKUB1A6NFN9 424 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 CLIC1O00299 241 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 OXSR1O95747 527 aaPredicted RBP18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 PPIBP23284 216 aaKnown RBP18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 MAGEA5P43359 124 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 COQ5Q5HYK3 327 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 COX20Q5RI15 118 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 GFRALQ6UXV0 394 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 DLEU7Q6UYE1 221 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 C16orf62Q7Z3J2 963 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 PIGWQ7Z7B1 504 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 RETREG3Q86VR2 466 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 PLCZ1Q86YW0 608 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 GHDCQ8N2G8 530 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 WDSUB1Q8N9V3 476 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 PNPT1Q8TCS8 783 aaKnown RBP18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 AURKBQ96GD4 344 aaPredicted RBP18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 TBL1XR1Q9BZK7 514 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 RAD21L1Q9H4I0 556 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 VAPAQ9P0L0 249 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 LIPT1Q9Y234 373 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 CAPN7Q9Y6W3 813 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 NINQ8N4C6 2090 aa18.33■□□□□ 0.52
CSNK1E-207ENST00000430335 A0A1W2PQD3 144 aa18.32■□□□□ 0.52
CSNK1E-207ENST00000430335 C2orf72A6NCS6 295 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms