RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TECPR1Q7Z6L1 1165 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PARGQ86W56 976 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CPOQ8IVL8 374 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 ZNF433Q8N7K0 673 aaPredicted RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 NUP43Q8NFH3 380 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 OR52I1Q8NGK6 324 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 LCN9Q8WX39 176 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 LMLNQ96KR4 655 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CMTM3Q96MX0 182 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 TMEM38AQ9H6F2 299 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 THSD1Q9NS62 852 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PLCXD1Q9NUJ7 323 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 COQ3Q9NZJ6 369 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 EXTL2Q9UBQ6 330 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 NCOR2Q9Y618 2525 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 A0A1W2PPC1 479 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 DAPL1A0PJW8 107 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 OLFM2O95897 454 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 LAMP2P13473 410 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CD79BP40259 229 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 HTRA4P83105 476 aaPredicted RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 ELAVL3Q14576 367 aaKnown RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 SYT14P1Q58G82 188 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CDC73Q6P1J9 531 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 FIGNL1Q6PIW4 674 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 SLC36A4Q6YBV0 504 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 ZNF547Q8IVP9 402 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 ADGRF3Q8IZF5 1079 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CPA6Q8N4T0 437 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 SAMD12Q8N8I0 201 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 OR4C15Q8NGM1 316 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 ASB15Q8WXK1 588 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 SAMD8Q96LT4 415 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 BARHL1Q9BZE3 327 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 HOXD1Q9GZZ0 328 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PRO3102Q9H379 93 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CNOT2Q9NZN8 540 aaKnown RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 MRPL15Q9P015 296 aaKnown RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 ATG4BQ9Y4P1 393 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 KCNE3Q9Y6H6 103 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 HEPACAM2A8MVW5 462 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 FAM47E-STBD1D6RA91 191 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 FOXE1O00358 373 aaPredicted RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 HRO43593 1189 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 OR5F1O95221 314 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PCSK2P16519 638 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PRKACAP17612 351 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 MPIP34949 423 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 MAP2K3P46734 347 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 HNRNPFP52597 415 aaKnown RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 CTBP2P56545 445 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 TAS2R38P59533 333 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 STXBP1P61764 594 aaKnown RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 TMEM31Q5JXX7 168 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 RNF44Q7L0R7 432 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CDK20Q8IZL9 346 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PDXPQ96GD0 296 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 PSD2Q9BQI7 771 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 DPH1Q9BZG8 443 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 DDX31Q9H8H2 851 aaKnown RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 PHPT1Q9NRX4 125 aaPredicted RBP7.57□□□□□ -1.2
HPS4-205ENST00000429411 FBXL12Q9NXK8 326 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 FTSJ1Q9UET6 329 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 SPATA2Q9UM82 520 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 RWDD3Q9Y3V2 267 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 WDR45Q9Y484 360 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 FCMRO60667 390 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 MRPS14O60783 128 aaKnown RBP7.56□□□□□ -1.2
HPS4-205ENST00000429411 TOXO94900 526 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 APBB3O95704 486 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 RPL4P36578 427 aaKnown RBP7.56□□□□□ -1.2
HPS4-205ENST00000429411 KCNJ5P48544 419 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 ILKQ13418 452 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 BTBD16Q32M84 506 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 FAM209AQ5JX71 171 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 PRICKLE2Q7Z3G6 844 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 KLHL36Q8N4N3 616 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 ACOT4Q8N9L9 421 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 SLC37A3Q8NCC5 494 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 PROKR2Q8NFJ6 384 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 OR2L2Q8NH16 312 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 SPRYD4Q8WW59 207 aaPredicted RBP7.56□□□□□ -1.2
HPS4-205ENST00000429411 NEURL3Q96EH8 262 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 ZNF582Q96NG8 517 aaPredicted RBP7.56□□□□□ -1.2
HPS4-205ENST00000429411 GAL3ST1Q99999 423 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 MS4A8Q9BY19 250 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 ZBP1Q9H171 429 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 CA5BQ9Y2D0 317 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 EDDM13A0A1B0GTR0 161 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 A0A1W2PRG6 482 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 NOTOA8MTQ0 251 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 C12orf71A8MTZ7 269 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 ZNF670-ZNF695F2Z2N8 137 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 PSMD9O00233 223 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 CACNB4O00305 520 aaPredicted RBP7.56□□□□□ -1.2
HPS4-205ENST00000429411 SOCS6O14544 535 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 NPC1O15118 1278 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 YES1P07947 543 aa7.56□□□□□ -1.2
HPS4-205ENST00000429411 HTR3AP46098 478 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms