RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 GATSQ8NAP1 163 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 ZNF597Q96LX8 424 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 GNRHR2Q96P88 292 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 SECISBP2Q96T21 854 aaKnown RBP13.34□□□□□ -0.27
SGCE-204ENST00000428696 OSBPL11Q9BXB4 747 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 ANGPTL4Q9BY76 406 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 SH2D2AQ9NP31 389 aa13.34□□□□□ -0.27
SGCE-204ENST00000428696 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
SGCE-204ENST00000428696 BSNQ9UPA5 3926 aa13.33□□□□□ -0.27
SGCE-204ENST00000428696 NPIPA5A0A0B4J1W7 369 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 NPIPA7E9PJI5 369 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SCDO00767 359 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SOX30O94993 753 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 AGR2O95994 175 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ZCCHC18P0CG32 403 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 NPIPA8P0DM63 369 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 NR2F1P10589 423 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 TCEA1P23193 301 aaKnown RBP13.33□□□□□ -0.28
SGCE-204ENST00000428696 MST1P26927 711 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 EVI2BP34910 448 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 HPCAP84074 193 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 FLYWCH1Q4VC44 716 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SLC30A6Q6NXT4 461 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ZAR1Q86SH2 424 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SLC22A16Q86VW1 577 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ATCAYQ86WG3 371 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 POU5F2Q8N7G0 328 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 OR1J4Q8NGS1 313 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ZFP90Q8TF47 636 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 THUMPD3Q9BV44 507 aaKnown RBP13.33□□□□□ -0.28
SGCE-204ENST00000428696 TTTY12Q9BZ98 90 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 LDAHQ9H6V9 325 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 PROK2Q9HC23 129 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ZFP64Q9NPA5 681 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SLC52A3Q9NQ40 469 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SDHAF3Q9NRP4 125 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 B4GALT7Q9UBV7 327 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ARL2BPQ9Y2Y0 163 aa13.33□□□□□ -0.28
SGCE-204ENST00000428696 ANKRD33BA6NCL7 494 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 TMEM247A6NEH6 219 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 WISP2O76076 250 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 UNC5CO95185 931 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 RFPL3SP0C7P2 107 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 GDF1P27539 372 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 MAGEA5P43359 124 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 CAPRIN1Q14444 709 aaKnown RBP13.32□□□□□ -0.28
SGCE-204ENST00000428696 GFRALQ6UXV0 394 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 HMGN2P46Q86SG4 172 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 DHDDSQ86SQ9 333 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 ZFP62Q8NB50 900 aaPredicted RBP13.32□□□□□ -0.28
SGCE-204ENST00000428696 OR52N2Q8NGI0 321 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 DUSP19Q8WTR2 217 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 NR4A3Q92570 626 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 HOXB13Q92826 284 aaPredicted RBP13.32□□□□□ -0.28
SGCE-204ENST00000428696 ROPN1LQ96C74 230 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 SDF2Q99470 211 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 UBQLN4Q9NRR5 601 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 PPP4R1LQ9P1A2 415 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 MKLN1Q9UL63 735 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 ZNF462Q96JM2 2506 aa13.32□□□□□ -0.28
SGCE-204ENST00000428696 GTPBP1O00178 669 aaKnown RBP13.31□□□□□ -0.28
SGCE-204ENST00000428696 HMGN4O00479 90 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 MRASO14807 208 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 ZNHIT1O43257 154 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 NDUFB5O43674 189 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 FCMRO60667 390 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 STX11O75558 287 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 MRPL49Q13405 166 aaKnown RBP13.31□□□□□ -0.28
SGCE-204ENST00000428696 SNTA1Q13424 505 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 SLC10A1Q14973 349 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.31□□□□□ -0.28
SGCE-204ENST00000428696 ARHGAP11BQ3KRB8 267 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 GKAP1Q5VSY0 366 aaPredicted RBP13.31□□□□□ -0.28
SGCE-204ENST00000428696 RETREG3Q86VR2 466 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 TMEM251Q8N6I4 163 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 ZNF527Q8NB42 609 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 FAM110BQ8TC76 370 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 MIPOL1Q8TD10 442 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 TSPEARQ8WU66 669 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 TRIM8Q9BZR9 551 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 RAD21L1Q9H4I0 556 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 SLC25A37Q9NYZ2 338 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 VAPAQ9P0L0 249 aa13.31□□□□□ -0.28
SGCE-204ENST00000428696 ANKUB1A6NFN9 424 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 C17orf51A8MQB3 221 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 FBP2O00757 339 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 AIM2O14862 343 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 ASNA1O43681 348 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 TRIM3O75382 744 aaPredicted RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 CYP7B1O75881 506 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 OXSR1O95747 527 aaPredicted RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 FAM107AO95990 144 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 CELA3AP09093 270 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 GNLYP22749 145 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms