RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CNR1P21554 472 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 OR1E1P30953 314 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 FRKP42685 505 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 VEGFCP49767 419 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 NR0B1P51843 470 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 IL10RAQ13651 578 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 FAM74A3Q4VXF1 159 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 CPTPQ5TA50 214 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ANXA8L1Q5VT79 327 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 DHRS7BQ6IAN0 325 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 ZNF322Q6U7Q0 402 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 CCDC36Q8IYA8 594 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 NXPE1Q8N323 547 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 OR4F15Q8NGB8 312 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 RPS4Y2Q8TD47 263 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 GTPBP3Q969Y2 492 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 FERD3LQ96RJ6 166 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 PIGMQ9H3S5 423 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 DDX31Q9H8H2 851 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 ANKHD1Q8IWZ3 2542 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 NCF1BA6NI72 391 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 NCF1CA8MVU1 366 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 KLF4O43474 513 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 SOX30O94993 753 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ETHE1O95571 254 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 H1F0P07305 194 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 SLC10A3P09131 477 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ZDHHC11BP0C7U3 371 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 MPGP29372 298 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 MC4RP32245 332 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 KIAA1024LP59773 190 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 GMFBP60983 142 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 SPIBQ01892 262 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ZNF763Q0D2J5 394 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 OXR1Q8N573 874 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ATAD1Q8NBU5 361 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 WDR34Q96EX3 536 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 PITHD1Q9GZP4 211 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 BCL2L10Q9HD36 194 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 PRDM9Q9NQV7 894 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ABRACLQ9P1F3 81 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 CAMK2AQ9UQM7 478 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 TRBV4-1A0A0J9YWV2 114 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 KDM4FA0A1W2PPD8 638 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 NAP1L6A6NFF2 107 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 TLR4O00206 839 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ATG12O94817 140 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 URODP06132 367 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ARSIQ5FYB1 569 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 TEX30Q5JUR7 227 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 MOSPD2Q8NHP6 518 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ELMOD3Q96FG2 381 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 TXNRD2Q9NNW7 524 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 EXOSC3Q9NQT5 275 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 PPIL1Q9Y3C6 166 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 C5orf52A6NGY3 159 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ACAA1P09110 424 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 MMP11P24347 488 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 RFC3P40938 356 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 FAM69AQ5T7M9 428 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 SIDT2Q8NBJ9 832 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 OR6S1Q8NH40 331 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 NSMAFQ92636 917 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 PHF21AQ96BD5 680 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ZNF775Q96BV0 537 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 FKBPLQ9UIM3 349 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 EXOSC1Q9Y3B2 195 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 ANKRD11Q6UB99 2663 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 AKAP13Q12802 2813 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 FOXE1O00358 373 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 GPR39O43194 453 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 GKP32189 559 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 PFN3P60673 137 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 CACNG1Q06432 222 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 SRSF4Q08170 494 aaKnown RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 PLD1Q13393 1074 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ZNF235Q14590 738 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 CDKN3Q16667 212 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 SPRYD7Q5W111 196 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 GRHL2Q6ISB3 625 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 C3orf33Q6P1S2 294 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 PDZD9Q8IXQ8 264 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 RAET1EQ8TD07 263 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 DMRTA2Q96SC8 542 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 COPS8Q99627 209 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 GPA33Q99795 319 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 AKAP7Q9P0M2 348 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 NTMQ9P121 344 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 GPN3Q9UHW5 284 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 ATRXP46100 2492 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ADAMTS20P59510 1910 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ZNF729A6NN14 1252 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 CREBL2O60519 120 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 GPR37L1O60883 481 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 OAZ2O95190 189 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 CD8AP01732 235 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 C8GP07360 202 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 SAGP10523 405 aaPredicted RBP4.82□□□□□ -1.64
RIF1-203ENST00000428287 EPXP11678 715 aa4.82□□□□□ -1.64
RIF1-203ENST00000428287 ARFIP1P53367 373 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms