RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZNF551Q7Z340 670 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 SPRED1Q7Z699 444 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 VASH2Q86V25 355 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 CLECL1Q8IZS7 167 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 ACOT4Q8N9L9 421 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 CENPOQ9BU64 300 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 SORBS1Q9BX66 1292 aaKnown RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 TVP23BQ9NYZ1 205 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 FARSAQ9Y285 508 aaKnown RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 E2F3O00716 465 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 CRHBPP24387 322 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 MVKQ03426 396 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 IL18Q14116 193 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 FAM180AQ6UWF9 173 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 FAM220AQ7Z4H9 259 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 SLC35F3Q8IY50 421 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 TMEM151AQ8N4L1 468 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 OR7G1Q8NGA0 311 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 RPL3LQ92901 407 aaKnown RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 SLC30A2Q9BRI3 323 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 TSPAN10Q9H1Z9 355 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 SEMA6CQ9H3T2 930 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 GPRC5BQ9NZH0 403 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 ENPP5Q9UJA9 477 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 GSTK1Q9Y2Q3 226 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 DOCK8Q8NF50 2099 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 TRBC2A0A5B9 178 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 BLOC1S5-TXNDC5H3BN57 136 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 FXYD1O00168 92 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 SSNA1O43805 119 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 ALPLP05186 524 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 LCKP06239 509 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 ANXA8P13928 327 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 PDX1P52945 283 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 CDK5R2Q13319 367 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 RNASE12Q5GAN4 147 aaKnown RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 FAM86B1Q8N7N1 296 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 CHDHQ8NE62 594 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 FCGR1BQ92637 280 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 APIPQ96GX9 242 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 EGLN2Q96KS0 407 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 KIR3DX1Q9H7L2 352 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 NKIRAS2Q9NYR9 191 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 ABCD2Q9UBJ2 740 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 NXT1Q9UKK6 140 aaKnown RBP10.02□□□□□ -0.81
TCOF1-204ENST00000427724 RIMKLBQ9ULI2 386 aa10.02□□□□□ -0.81
TCOF1-204ENST00000427724 H3BML4 177 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ST6GAL1P15907 406 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF181Q2M3W8 571 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 C5orf22Q49AR2 442 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CTSL3PQ5NE16 218 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 HENMT1Q5T8I9 393 aaKnown RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 OPN5Q6U736 354 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 COMMD6Q7Z4G1 85 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 OR2L5Q8NG80 312 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 OR13F1Q8NGS4 319 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TP53INP1Q96A56 240 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 SERINC2Q96SA4 455 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ADOQ96SZ5 270 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 EPYCQ99645 322 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TRIM2Q9C040 744 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 SLC22A4Q9H015 551 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CHST8Q9H2A9 424 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF385DQ9H6B1 395 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CENPMQ9NSP4 180 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 FAM120CQ9NX05 1096 aaKnown RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 MKLN1Q9UL63 735 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CACNA1CQ13936 2221 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TRGV8A0A0C4DH27 118 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 UPK1BO75841 260 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 IGLV3-25P01717 112 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CEACAM5P06731 702 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 MMP2P08253 660 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TNFRSF1BP20333 461 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 EPHA4P54764 986 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CLDN8P56748 225 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CSNK2BP67870 215 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 OXA1LQ15070 435 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 UGT3A2Q3SY77 523 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 C10orf62Q5T681 223 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 LCTLQ6UWM7 567 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 RNF130Q86XS8 419 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 RNF175Q8N4F7 328 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 OR2L8Q8NGY9 312 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 GTF2H4Q92759 462 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 MAL2Q969L2 176 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 RHBDF1Q96CC6 855 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 POLR2J3Q9H1A7 115 aaKnown RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 MBD1Q9UIS9 605 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ACSL6Q9UKU0 697 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ABCA4P78363 2273 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TRPM7Q96QT4 1865 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 NPIPA2E9PIF3 369 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 NPIPA3F8WFD2 350 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 GALR2O43603 387 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 SOX14O95416 240 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 VNN2O95498 520 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 NXPH1P58417 271 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TSTQ16762 297 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms