RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 SF3B6Q9Y3B4 125 aaKnown RBP7.04□□□□□ -1.28
LINC01108-201ENST00000427276 OR51B4Q9Y5P0 310 aa7.04□□□□□ -1.28
LINC01108-201ENST00000427276 SLC16A5O15375 505 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 OR1F1O43749 312 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 EFCAB14O75071 495 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 FZD7O75084 574 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 LEFTY1O75610 366 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 MPC2O95563 127 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 POP4O95707 220 aaKnown RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TPOP07202 933 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ACADMP11310 421 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 SLC6A1P30531 599 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 NUP62P37198 522 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 SSR2P43308 183 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 CLDN2P57739 230 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 RGS8P57771 180 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 POLR2LP62875 67 aaKnown RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TAP2Q03519 686 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 STK11Q15831 433 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ST3GAL2Q16842 350 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TMEM201Q5SNT2 666 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 GDPD4Q6W3E5 623 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 USP50Q70EL3 339 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 KIAA0907Q7Z7F0 614 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 VRK2Q86Y07 508 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 OR51L1Q8NGJ5 315 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TTC9Q92623 222 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 RFKQ969G6 155 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ZG16BQ96DA0 208 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 C16orf58Q96GQ5 468 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 LINC00052Q96N35 136 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ORAI3Q9BRQ5 295 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 FAIM2Q9BWQ8 316 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 BTBD1Q9H0C5 482 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 KCNN2Q9H2S1 579 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 HMX1Q9NP08 348 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 SCN3AQ9NY46 2000 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TESQ9UGI8 421 aaKnown RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ELF5Q9UKW6 265 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 DOCK6Q96HP0 2047 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 DSPPQ9NZW4 1301 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TP53BP1Q12888 1972 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TMEM129A0AVI4 362 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 H0YC42 278 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PIP5K1CO60331 668 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 KHDRBS3O75525 346 aaKnown RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 UBXN7O94888 489 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 CLTBP09497 229 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TFPIP10646 304 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PTHLHP12272 177 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 AHCYP23526 432 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 NOS3P29474 1203 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 HOXC8P31273 242 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PYCR1P32322 319 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 IRS1P35568 1242 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 GCGRP47871 477 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 FLT3LGP49771 235 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 FGL2Q14314 439 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 HYAL4Q2M3T9 481 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 MINDY4Q4G0A6 757 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PRAMEF13Q5VWM6 474 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 NXPE4Q6UWF7 544 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 KCTD20Q7Z5Y7 419 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 NKAIN4Q8IVV8 208 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ZNF687Q8N1G0 1237 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 MOSPD2Q8NHP6 518 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PIGXQ8TBF5 258 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ST8SIA4Q92187 359 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 RAD51AP1Q96B01 352 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ALG14Q96F25 216 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 PAWRQ96IZ0 340 aaKnown RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 SEC22CQ9BRL7 303 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 ALG8Q9BVK2 526 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 SAV1Q9H4B6 383 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 CWH43Q9H720 699 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 MCCC2Q9HCC0 563 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 MYNNQ9NPC7 610 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 WSB2Q9NYS7 404 aaPredicted RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 MGAT4CQ9UBM8 478 aa7.03□□□□□ -1.28
LINC01108-201ENST00000427276 AK6Q9Y3D8 172 aaKnown RBP7.03□□□□□ -1.28
LINC01108-201ENST00000427276 FXYD6-FXYD2A0A087WZ82 144 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 TCRBV16S1A1N1A0A5B0 115 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 A8MVJ9 347 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 PLPP1O14494 284 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 GPR171O14626 319 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 RGS9O75916 674 aaPredicted RBP7.02□□□□□ -1.29
LINC01108-201ENST00000427276 FGBP02675 491 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 HPXP02790 462 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 HLA-FP30511 346 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 IFNGR2P38484 337 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 FNTBP49356 437 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 DEFA5Q01523 94 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 ELAVL2Q12926 359 aaKnown RBP7.02□□□□□ -1.29
LINC01108-201ENST00000427276 CXXC5Q7LFL8 322 aaKnown RBP7.02□□□□□ -1.29
LINC01108-201ENST00000427276 PRSS42Q7Z5A4 293 aa7.02□□□□□ -1.29
LINC01108-201ENST00000427276 NR2C2APQ86WQ0 139 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms