RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 CDH10Q9Y6N8 788 aa9.64□□□□□ -0.87
CTCFL-206ENST00000426658 CIB4A0PJX0 185 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 A8MUA0 341 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SGK494L7N484 410 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SLC9A3R1O14745 358 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 NDUFS4O43181 175 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 RGS9O75916 674 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ZNF30P17039 623 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SDHBP21912 280 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CTGFP29279 349 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 RPL4P36578 427 aaKnown RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CNKSR3Q6P9H4 555 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 NXPE4Q6UWF7 544 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 LRRC28Q86X40 367 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 GPR32P1Q8NGA4 272 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 OR2T35Q8NGX2 323 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 OR56A3Q8NH54 315 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 IRF7Q92985 503 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SLC6A18Q96N87 628 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TREX2Q9BQ50 279 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 EMC7Q9NPA0 242 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 MRPL15Q9P015 296 aaKnown RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 KCND3Q9UK17 655 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ICE1Q9Y2F5 2266 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 PCM1Q15154 2024 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ATG2BQ96BY7 2078 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 PLXNB2O15031 1838 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ABHD14A-ACY1A0A1B0GW23 586 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 J3QLW9 94 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 FOXE1O00358 373 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ZNF821O75541 412 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SLCO2B1O94956 709 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 H2AFB2P0C5Z0 115 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 MYOGP15173 224 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ZNF19P17023 458 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 DDCP20711 480 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 KELP23276 732 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 GIFP27352 417 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TSPAN5P62079 268 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CAMK1Q14012 370 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TMEM107Q6UX40 140 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 FTMTQ8N4E7 242 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 OR4M1Q8NGD0 313 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TCEAL4Q96EI5 215 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 C19orf43Q9BQ61 176 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TMEM175Q9BSA9 504 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 IFT27Q9BW83 186 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 KRCC1Q9NPI7 259 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 NUBP2Q9Y5Y2 271 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SEC16AO15027 2179 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CHP2O43745 196 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 REM1O75628 298 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SOD1P00441 154 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CD3GP09693 182 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 LAMP2P13473 410 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 FGF9P31371 208 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ACVR1BP36896 505 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CCR8P51685 355 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 DBPQ10586 325 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SLC9A5Q14940 896 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CDKN3Q16667 212 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 GAREM2Q75VX8 874 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 OR4N5Q8IXE1 308 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ADGRF3Q8IZF5 1079 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TOR1AIP2Q8NFQ8 470 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 GRHL3Q8TE85 626 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 UCN3Q969E3 161 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 NEURL3Q96EH8 262 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CAMK1GQ96NX5 476 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 LYSMD1Q96S90 227 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 SLC46A2Q9BY10 475 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 RBCK1Q9BYM8 510 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 A4GALTQ9NPC4 353 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 CUEDC1Q9NWM3 386 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ZSCAN32Q9NX65 697 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 TAAR2Q9P1P5 351 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 HCN3Q9P1Z3 774 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 DEC1Q9P2X7 70 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 OR51B4Q9Y5P0 310 aa9.63□□□□□ -0.87
CTCFL-206ENST00000426658 ZNF860A6NHJ4 632 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 SLC31A1O15431 190 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 UBXN7O94888 489 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 F8A1P23610 371 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 KHKP50053 298 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 EEF1A2Q05639 463 aaKnown RBP9.62□□□□□ -0.87
CTCFL-206ENST00000426658 INSL4Q14641 139 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 GRK1Q15835 563 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 RNLSQ5VYX0 342 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 FCRLBQ6BAA4 426 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 RPLP0P6Q8NHW5 317 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 SIPA1Q96FS4 1042 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 OR2M2Q96R28 347 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 SPNS1Q9H2V7 528 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 ISYNA1Q9NPH2 558 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 PTTG3PQ9NZH4 202 aa9.62□□□□□ -0.87
CTCFL-206ENST00000426658 EXO1Q9UQ84 846 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms