RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 MGAT4AQ9UM21 535 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 ICKQ9UPZ9 632 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 NTNG1Q9Y2I2 539 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 LAMA1P25391 3075 aa13.44□□□□□ -0.26
MSH5-206ENST00000423982 A0A087WUU8 490 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 TRDV1A0A1B0GX56 115 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 A0A1W2PRQ8 180 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 MMP20O60882 483 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 TIMP2P16035 220 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 CXCL3P19876 107 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 PRKACBP22694 351 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 CCT3P49368 545 aaKnown RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 ZBTB37Q5TC79 503 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 RAET1GQ6H3X3 334 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 SLC36A4Q6YBV0 504 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 C11orf96Q7Z7L8 435 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 LRRC56Q8IYG6 542 aaPredicted RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 HLA-CQ95604 372 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 OR2AG1Q9H205 316 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 PCYT1BQ9Y5K3 369 aaPredicted RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 ZC3H12DA2A288 527 aaKnown RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 FAM183AA6NL82 134 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 QSOX1O00391 747 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 IL9P15248 144 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 CDH11P55287 796 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 POU4F3Q15319 338 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 C1orf94Q6P1W5 598 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 ANKRD53Q8N9V6 530 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 OR5P2Q8WZ92 322 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 HSD17B8Q92506 261 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 TTC9Q92623 222 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 ZG16BQ96DA0 208 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 ZNF607Q96SK3 696 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 CUEDC1Q9NWM3 386 aaPredicted RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 CLEC4AQ9UMR7 237 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 ZFR2Q9UPR6 939 aaKnown RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 SLC27A6Q9Y2P4 619 aa13.43□□□□□ -0.26
MSH5-206ENST00000423982 SIRT4Q9Y6E7 314 aaPredicted RBP13.43□□□□□ -0.26
MSH5-206ENST00000423982 TICRRQ7Z2Z1 1910 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 BTN3A3O00478 584 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 TMPRSS11DO60235 418 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 TRIM3O75382 744 aaPredicted RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 EIF4EP06730 217 aaKnown RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 ACADMP11310 421 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 GNSP15586 552 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 PSMB5P28074 263 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 SSTR2P30874 369 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 PER3P56645 1201 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 POLR2LP62875 67 aaKnown RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 FZD5Q13467 585 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 ZNF750Q32MQ0 723 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 EOGTQ5NDL2 527 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 KRT74Q7RTS7 529 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 KIAA0907Q7Z7F0 614 aaPredicted RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 OR9A1PQ8NGU1 263 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 TEX47Q8TBZ9 253 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 WDR34Q96EX3 536 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 TBX5Q99593 518 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 ZSCAN5AQ9BUG6 496 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 ZFP64Q9NPA5 681 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 NUDT15Q9NV35 164 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 GPR55Q9Y2T6 319 aaPredicted RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 PIAS3Q9Y6X2 628 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 CHRM4P08173 479 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 OR10A3P58181 314 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 MINDY4Q4G0A6 757 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 SLC25A30Q5SVS4 291 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 FAM20CQ8IXL6 584 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 SLC44A3Q8N4M1 653 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 SPERTQ8NA61 448 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 OR4Q3Q8NH05 313 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 ZNF431Q8TF32 576 aaPredicted RBP13.42□□□□□ -0.26
MSH5-206ENST00000423982 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 ZNF649Q9BS31 505 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 ABCG5Q9H222 651 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 SLCO1C1Q9NYB5 712 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 GLTPQ9NZD2 209 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 KCNN3Q9UGI6 736 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 NCKAP1Q9Y2A7 1128 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 KCNE3Q9Y6H6 103 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 CSNK1G3Q9Y6M4 447 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 DMDP11532 3685 aa13.42□□□□□ -0.26
MSH5-206ENST00000423982 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 A0A1W2PS29 197 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 CPSF4LA6NMK7 179 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 SGK494L7N484 410 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 EEF1E1O43324 174 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 SLC22A5O76082 557 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 UBXN7O94888 489 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 ACP5P13686 325 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 TBXA2RP21731 343 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 SLC6A1P30531 599 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 BTCP35070 178 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 TRIM23P36406 574 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PNLIPRP1P54315 467 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 POU6F2P78424 691 aaPredicted RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 SMAD4Q13485 552 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms