RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CMPK2Q5EBM0 449 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 DCST2Q5T1A1 773 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 SAXO2Q658L1 398 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 TIGD3Q6B0B8 471 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 OR5M10Q6IEU7 315 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 TMEM81Q6P7N7 255 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 BNC2Q6ZN30 1099 aaPredicted RBP14.41□□□□□ -0.1
BRAT1-202ENST00000421712 C16orf62Q7Z3J2 963 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 CPLX4Q7Z7G2 160 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 RNF130Q86XS8 419 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 FUNDC1Q8IVP5 155 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 PNPT1Q8TCS8 783 aaKnown RBP14.41□□□□□ -0.1
BRAT1-202ENST00000421712 NEURL3Q96EH8 262 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 TMEM41AQ96HV5 264 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 NSRP1Q9H0G5 558 aaKnown RBP14.41□□□□□ -0.1
BRAT1-202ENST00000421712 SERHLQ9NQF3 203 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 SDHAF3Q9NRP4 125 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 TMEM45AQ9NWC5 275 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 FBXO34Q9NWN3 711 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 PPP4R1LQ9P1A2 415 aa14.41□□□□□ -0.1
BRAT1-202ENST00000421712 LRRC3CA6NJW4 275 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 AGR2O95994 175 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 ABOP16442 354 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 ELAVL4P26378 380 aaKnown RBP14.4□□□□□ -0.1
BRAT1-202ENST00000421712 TRPC1P48995 793 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 MAN2A2P49641 1150 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.4□□□□□ -0.1
BRAT1-202ENST00000421712 HYAL4Q2M3T9 481 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 MARCH3Q86UD3 253 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 FAM110BQ8TC76 370 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 GTF2H4Q92759 462 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 RAB8BQ92930 207 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 ELAC2Q9BQ52 826 aaKnown RBP14.4□□□□□ -0.1
BRAT1-202ENST00000421712 SERHL2Q9H4I8 314 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 ABCG2Q9UNQ0 655 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 WIF1Q9Y5W5 379 aa14.4□□□□□ -0.1
BRAT1-202ENST00000421712 TRGV5A0A0B4J1U4 118 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 A0A1B0GTH9 108 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 GMNCA6NCL1 334 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 SCDO00767 359 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 SNPHO15079 494 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 ZNHIT1O43257 154 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 FADS1O60427 444 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 AK1P00568 194 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 CELA3AP09093 270 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 CAPN3P20807 821 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 LCN1P31025 176 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 LSP1P33241 339 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 CRATP43155 626 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 CASP6P55212 293 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 GTDC1Q4AE62 458 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 FLYWCH1Q4VC44 716 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 EXOSC6Q5RKV6 272 aaKnown RBP14.39□□□□□ -0.11
BRAT1-202ENST00000421712 ZAR1Q86SH2 424 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 PLCZ1Q86YW0 608 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 OR4K17Q8NGC6 315 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 OR4C3Q8NH37 302 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 MIPOL1Q8TD10 442 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 DTNBP1Q96EV8 351 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF385DQ9H6B1 395 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF703Q9H7S9 590 aaPredicted RBP14.39□□□□□ -0.11
BRAT1-202ENST00000421712 ZDHHC11Q9H8X9 412 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 UBQLN4Q9NRR5 601 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 SLC6A13Q9NSD5 602 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 MRGBPQ9NV56 204 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 SH3BGRL2Q9UJC5 107 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 C15orf41Q9Y2V0 281 aa14.39□□□□□ -0.11
BRAT1-202ENST00000421712 SPENQ96T58 3664 aaKnown RBP14.38□□□□□ -0.11
BRAT1-202ENST00000421712 NPIPA5A0A0B4J1W7 369 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 TRGV8A0A0C4DH27 118 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 A0A1W2PP18 115 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 NPIPA7E9PJI5 369 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ANGPT2O15123 496 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 NDUFB5O43674 189 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 GMFGO60234 142 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 CBR3O75828 277 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 OXSR1O95747 527 aaPredicted RBP14.38□□□□□ -0.11
BRAT1-202ENST00000421712 C1QCP02747 245 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 SNRPB2P08579 225 aaKnown RBP14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ZCCHC18P0CG32 403 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 NPIPA8P0DM63 369 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 TBXA2RP21731 343 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 PTGS2P35354 604 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 GPR68Q15743 365 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ARHGAP11BQ3KRB8 267 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 GPAT3Q53EU6 434 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 PAGE3Q5JUK9 113 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 FNDC7Q5VTL7 733 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ARHGAP11AQ6P4F7 1023 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 SPATA21Q7Z572 469 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 SPPL2CQ8IUH8 684 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF614Q8N883 585 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 WDSUB1Q8N9V3 476 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 GATSQ8NAP1 163 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF527Q8NB42 609 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 ZFP90Q8TF47 636 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 DUSP19Q8WTR2 217 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 C10orf82Q8WW14 230 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 SDF2Q99470 211 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 HOXD1Q9GZZ0 328 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms