RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 DUSP8Q13202 625 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 EBPQ15125 230 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TRIP6Q15654 476 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RFX4Q33E94 735 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 SFT2D3Q587I9 215 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 C3orf38Q5JPI3 329 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 FGD3Q5JSP0 725 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 WLSQ5T9L3 541 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 FAAH2Q6GMR7 532 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TYW3Q6IPR3 259 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 SHQ1Q6PI26 577 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 FIGNL1Q6PIW4 674 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PAPD4Q6PIY7 484 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DHRS13Q6UX07 377 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 NPSR1Q6W5P4 371 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF836Q6ZNA1 936 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DGAT2L6Q6ZPD8 337 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 SHISA6Q6ZSJ9 500 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PLEKHM3Q6ZWE6 761 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 OVCH1Q7RTY7 1134 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 STK32CQ86UX6 486 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 OFCC1Q8IZS5 231 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 GALNT4Q8N4A0 578 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ESX1Q8N693 406 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF527Q8NB42 609 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 GALNT6Q8NCL4 622 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PLPP5Q8NEB5 264 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PIK3C3Q8NEB9 887 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 B3GNT7Q8NFL0 401 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 OR10Q1Q8NGQ4 319 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 OR1N1Q8NGS0 311 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 OR52P1PQ8NH57 321 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DOK4Q8TEW6 326 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PHF10Q8WUB8 498 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PIK3R3Q92569 461 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 HOXB13Q92826 284 aaPredicted RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PMM1Q92871 262 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PMEPA1Q969W9 287 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RNF31Q96EP0 1072 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 NRBF2Q96F24 287 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF300Q96RE9 604 aaPredicted RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TAAR9Q96RI9 348 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 EPYCQ99645 322 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PIP5K1AQ99755 562 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ARHGDIGQ99819 225 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 OSBPL11Q9BXB4 747 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 POLR2J2Q9GZM3 115 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 WWTR1Q9GZV5 400 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 POLR2J3Q9H1A7 115 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 KRCC1Q9NPI7 259 aaPredicted RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 SMPD3Q9NY59 655 aaPredicted RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 USE1Q9NZ43 259 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TESQ9UGI8 421 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TMCC3Q9ULS5 477 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 CBLCQ9ULV8 474 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 RAB26Q9ULW5 256 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 ZNF232Q9UNY5 417 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 DTX4Q9Y2E6 619 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 SH3GLB1Q9Y371 365 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PTRH2Q9Y3E5 179 aaKnown RBP5.53□□□□□ -1.52
HMGB3-202ENST00000419110 TESMINQ9Y4I5 508 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PCDHGA3Q9Y5H0 932 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 CLDN16Q9Y5I7 305 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 USP34Q70CQ2 3546 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 EML6Q6ZMW3 1958 aa5.53□□□□□ -1.52
HMGB3-202ENST00000419110 PCSK5Q92824 1860 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 GVINP1Q7Z2Y8 2422 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 TRBV11-1A0A0K0K1C0 115 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.52□□□□□ -1.53
HMGB3-202ENST00000419110 C2orf92A0A1B0GVN3 265 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 GXYLT2A0PJZ3 443 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 PRAMEF27A3QJZ7 478 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 ARRDC5A6NEK1 342 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 AGAP5A6NIR3 686 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 TTLL8A6PVC2 850 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 G3V2T6 193 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 HRKO00198 91 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 TNFRSF11BO00300 401 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 FAAHO00519 579 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 SCDO00767 359 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 SOCS2O14508 198 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 GCM2O75603 506 aaPredicted RBP5.52□□□□□ -1.53
HMGB3-202ENST00000419110 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
HMGB3-202ENST00000419110 KCNK2O95069 426 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 GADD45GO95257 159 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 DDAH2O95865 285 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 RECKO95980 971 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 CLPSP04118 112 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 IGKV3-11P04433 115 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 H1F0P07305 194 aaKnown RBP5.52□□□□□ -1.53
HMGB3-202ENST00000419110 THRBP10828 461 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 HPGDP15428 266 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 ZNF28P17035 718 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 CSRP1P21291 193 aaKnown RBP5.52□□□□□ -1.53
HMGB3-202ENST00000419110 LCN1P31025 176 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 PIGAP37287 484 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 ETV5P41161 510 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 MAP3K8P41279 467 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 OR1E2P47887 323 aa5.52□□□□□ -1.53
HMGB3-202ENST00000419110 UGT2B15P54855 530 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms