RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PAQR9Q6ZVX9 377 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 C14orf178Q8N769 122 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 NEK11Q8NG66 645 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 OR2L5Q8NG80 312 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 ART4Q93070 314 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 FTHL17Q9BXU8 183 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 CCSER1Q9C0I3 900 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 DUS2Q9NX74 493 aaKnown RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 EPS15L1Q9UBC2 864 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZNF221Q9UK13 617 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 STRAPQ9Y3F4 350 aaKnown RBP2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 L3MBTL1Q9Y468 752 aa2.94□□□□□ -1.94
HMGB1P49-201ENST00000418882 TNRQ92752 1358 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 ACTL6AO96019 429 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 PSMB1P20618 241 aaKnown RBP2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 PRDX2P32119 198 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 POLR2FP61218 127 aaKnown RBP2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 MYBPC1Q00872 1141 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 SRYQ05066 204 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 DPYSQ14117 519 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 UBE2V2Q15819 145 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 FAM120AOSQ5T036 256 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 SPATA46Q5T0L3 261 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 MEDAGQ5VYS4 303 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZCCHC12Q6PEW1 402 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 IL34Q6ZMJ4 242 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 MOB1BQ7L9L4 216 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 BATF2Q8N1L9 274 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 LEMD2Q8NC56 503 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 SLC25A36Q96CQ1 311 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 PKNOX2Q96KN3 472 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 IMMP1LQ96LU5 166 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 Q9H3A6 140 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 ASB8Q9H765 288 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 SYTL2Q9HCH5 934 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 HOMER3Q9NSC5 361 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 RPS6KB2Q9UBS0 482 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 PDE10AQ9Y233 779 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 USP6P35125 1406 aa2.93□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZSCAN5BA6NJL1 495 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 TRIM64CA6NLI5 447 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 OR7A17O14581 309 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZBTB14O43829 449 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 BCAS2O75934 225 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 APBB3O95704 486 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 H2AFZP0C0S5 128 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 GAP43P17677 238 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 HLA-DPA1P20036 260 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 RPL4P36578 427 aaKnown RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 STARD6P59095 220 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 PLOD1Q02809 727 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 PSG7Q13046 419 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 CBX3Q13185 183 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 HERPUD1Q15011 391 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 BTNL3Q6UXE8 466 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 TRPM8Q7Z2W7 1104 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 NET1Q7Z628 596 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 RABEPKQ7Z6M1 372 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 NFAM1Q8NET5 270 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 OR10H4Q8NGA5 316 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 CCDC43Q96MW1 224 aaKnown RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZNF184Q99676 751 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 ABCG8Q9H221 673 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 THAP9Q9H5L6 903 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 LIN28AQ9H9Z2 209 aaKnown RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 PNO1Q9NRX1 252 aaKnown RBP2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 EHFQ9NZC4 300 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 ADAM22Q9P0K1 906 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 GHRLQ9UBU3 117 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 KCNN3Q9UGI6 736 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 NUDCQ9Y266 331 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 USP16Q9Y5T5 823 aa2.92□□□□□ -1.94
HMGB1P49-201ENST00000418882 NACAE9PAV3 2078 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 TTC26A0AVF1 554 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 SLC9B1P1A6NJY1 282 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 WWP2O00308 870 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 CPLX1O14810 134 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 ALOX15BO15296 676 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 PPIHO43447 177 aaKnown RBP2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 RAMP1O60894 148 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 SEC22BO75396 215 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 SCRG1O75711 98 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 GUCA1CO95843 209 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 SLC35G4P0C7Q5 338 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 DESP17661 470 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 TSPAN8P19075 237 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 PTPN6P29350 595 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 UGT1A3P35503 534 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 HTR5AP47898 357 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 IL17AQ16552 155 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 CYP51A1Q16850 503 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 IL23RQ5VWK5 629 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 SLX4IPQ5VYV7 408 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 OTPQ5XKR4 325 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 OR6B2Q6IFH4 312 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 ETFRF1Q6IPR1 90 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 STAC2Q6ZMT1 411 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 TMEM26Q6ZUK4 368 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 P4HA3Q7Z4N8 544 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 ZNF540Q8NDQ6 660 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms