RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 CBWD2Q8IUF1 395 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CCDC71Q8IV32 467 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PHC2Q8IXK0 858 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PYROXD2Q8N2H3 581 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 UBE2J2Q8N2K1 259 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 NECAB1Q8N987 351 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 TRMT10AQ8TBZ6 339 aaKnown RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SLC25A36Q96CQ1 311 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 HPDLQ96IR7 371 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SLC45A3Q96JT2 553 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 VSTM2LQ96N03 204 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CCDC28BQ9BUN5 200 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 ST6GALNAC5Q9BVH7 336 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 GSDMCQ9BYG8 508 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 OCR1Q9BZK8 76 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 LRRCC1Q9C099 1032 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 FAM192AQ9GZU8 254 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CLSTN2Q9H4D0 955 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 ALG9Q9H6U8 611 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 APMAPQ9HDC9 416 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 GPR83Q9NYM4 423 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 MBD2Q9UBB5 411 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CTSZQ9UBR2 303 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 CRLS1Q9UJA2 301 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 RARRES3Q9UL19 164 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 EMCNQ9ULC0 261 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SPATA2Q9UM82 520 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 SALL1Q9NSC2 1324 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 EIF4G1Q04637 1599 aaKnown RBP2.35□□□□□ -2.03
PTPRC-207ENST00000418674 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 PARD3Q8TEW0 1356 aa2.35□□□□□ -2.03
PTPRC-207ENST00000418674 IGHV3OR16-10A0A075B7F0 116 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 NPIPA5A0A0B4J1W7 369 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 A0A0U1RQS6 177 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 SERTM2A0A1B0GWG4 89 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 PCP4L1A6NKN8 68 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 KRTAP16-1A8MUX0 517 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 NPIPA2E9PIF3 369 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 NPIPA5E9PKD4 350 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 H7C423 109 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 PDHXO00330 501 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CFLARO15519 480 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CACNG3O60359 315 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 JAK2O60674 1132 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 BCAS1O75363 584 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 POP4O95707 220 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ECDO95905 644 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 GOT2P00505 430 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 GSTA1P08263 222 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 FGF4P08620 206 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 HCKP08631 526 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ANXA4P09525 319 aaPredicted RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ANXA8P13928 327 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CCDC130P13994 396 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ZNF44P15621 663 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 TSPAN8P19075 237 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 UCP1P25874 307 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 RFC4P35249 363 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CAPGP40121 348 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 PPT1P50897 306 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ATP4BP51164 291 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 RIDAP52758 137 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 HERVK_113P63132 956 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ERVK-8P63133 956 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 PJVKQ0ZLH3 352 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ELAVL2Q12926 359 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 EXOSC2Q13868 293 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 DCAF4L1Q3SXM0 396 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 FAM182AQ5T1J6 154 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ARMC12Q5T9G4 340 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ANXA8L1Q5VT79 327 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 LEG1Q6P5S2 330 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 METTL7BQ6UX53 244 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 C16orf62Q7Z3J2 963 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 FAM228AQ86W67 206 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 RNF130Q86XS8 419 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CCDC36Q8IYA8 594 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ZNF440Q8IYI8 595 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 SAMD12Q8N8I0 201 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 FAM184AQ8NB25 1140 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CCDC148Q8NFR7 591 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 OR52J3Q8NH60 311 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 MIPOL1Q8TD10 442 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 NPRL2Q8WTW4 380 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ANKRD49Q8WVL7 239 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 EMG1Q92979 244 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 BIRC7Q96CA5 298 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 NTNG2Q96CW9 530 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 RASD2Q96D21 266 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 C18orf12Q96KH6 178 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 AGAP3Q96P47 875 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 NPAS2Q99743 824 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ATF6BQ99941 703 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 HSD17B14Q9BPX1 270 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 C19orf43Q9BQ61 176 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 CHCHD5Q9BSY4 110 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 RBM24Q9BX46 236 aaKnown RBP2.34□□□□□ -2.03
PTPRC-207ENST00000418674 GPR174Q9BXC1 333 aa2.34□□□□□ -2.03
PTPRC-207ENST00000418674 ERVK-6Q9BXR3 956 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms