RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 SFXN5Q8TD22 340 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TRAPPC13A5PLN9 417 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 M0R233 179 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 CAPN3P20807 821 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 METTL2BQ6P1Q9 378 aaKnown RBP10.61□□□□□ -0.71
PTCH1-205ENST00000418258 BAIAP2L2Q6UXY1 529 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM19Q96HH6 336 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 SULT4A1Q9BR01 284 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 USP36Q9P275 1121 aaKnown RBP10.61□□□□□ -0.71
PTCH1-205ENST00000418258 CPNE7Q9UBL6 633 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 PCTPQ9UKL6 214 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 ENTPD2Q9Y5L3 495 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 LAMB4A4D0S4 1761 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TIMP2P16035 220 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 XCR1P46094 333 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 CSNK1A1P48729 337 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 SLC10A2Q12908 348 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-205ENST00000418258 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 GPR139Q6DWJ6 353 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 GRAMD2AQ8IUY3 354 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TMEFF1Q8IYR6 380 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 CLECL1Q8IZS7 167 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 CSNK2A3Q8NEV1 391 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 HIPK2Q9H2X6 1198 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 SRPK3Q9UPE1 567 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 A0A0A6YYC8 382 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-205ENST00000418258 I3L1I5 382 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-205ENST00000418258 H2AFB2P0C5Z0 115 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 CPOXP36551 454 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 MTNR1AP48039 350 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM236Q5W0B7 351 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 PLCXD3Q63HM9 321 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM151AQ8N4L1 468 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
PTCH1-205ENST00000418258 TAF1P21675 1872 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 H3BSA7 217 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PBX2P40425 430 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 RGS6P49758 472 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 RPP30P78346 268 aaKnown RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 OR51L1Q8NGJ5 315 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 POC1BQ8TC44 478 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 UBXN10Q96LJ8 280 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 CDC6Q99741 560 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 ECM29Q5VYK3 1845 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KIR2DS5A0A0G2JLQ3 304 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 A0A0G2JNG1 304 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 FAM230AA0A1W2PPH8 454 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 TVP23AA6NH52 213 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KIR2DS3K7RE56 304 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 FGF3P11487 239 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PRKXP51817 358 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 CLDN8P56748 225 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 GLO1Q04760 184 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KIR2DS5Q14953 304 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PNCKQ6P2M8 343 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF551Q7Z340 670 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SLC2A12Q8TD20 617 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 GPN2Q9H9Y4 310 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 MAB21L2Q9Y586 359 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 A6NIZ1 184 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PTHP01270 115 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KDELR2P33947 212 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 RAP1BP61224 184 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 RAP1AP62834 184 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 CDK3Q00526 305 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KIR2DS3Q14952 304 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KANK2Q63ZY3 851 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KIAA0907Q7Z7F0 614 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 NRMQ8IXM6 262 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 LRRC18Q8N456 261 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 COG8Q96MW5 612 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PELI2Q9HAT8 420 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 ACTL7AQ9Y615 435 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 C4BP0C0L5 1744 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 BCAT2O15382 392 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 JRKO75564 520 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SNAP29O95721 258 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 KNG1P01042 644 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 TNFRSF1BP20333 461 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 ZXDBP98169 803 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SCAPQ12770 1279 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 VSX1Q9NZR4 365 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SLC6A14Q9UN76 642 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 TOXO94900 526 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 PRSS56P0CW18 603 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 HTR1EP28566 365 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 HOXA11P31270 313 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-205ENST00000418258 CDKN2CP42773 168 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 SGSHP51688 502 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 C17orf99Q6UX52 265 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 MUS81Q96NY9 551 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 STUB1Q9UNE7 303 aa10.6□□□□□ -0.71
PTCH1-205ENST00000418258 ZNF780AO75290 641 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms