RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PLCL2Q9UPR0 1127 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 A0A0G2JK05 382 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 E7EQ34 232 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SIGLEC5O15389 551 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 GSTZ1O43708 216 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ITGA10O75578 1167 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SNAPINO95295 136 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SIX6O95475 246 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 FURINP09958 794 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SHC1P29353 583 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SIM1P81133 766 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 BDH1Q02338 343 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SIGLEC14Q08ET2 396 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF763Q0D2J5 394 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 DUSP4Q13115 394 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PDE7AQ13946 482 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 LDLRAD1Q5T700 205 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 OR5M10Q6IEU7 315 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 GRHL2Q6ISB3 625 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 C1orf94Q6P1W5 598 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 GSG1LQ6UXU4 331 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 CPXM2Q8N436 756 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC38A5Q8WUX1 472 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SKA2Q8WVK7 121 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 THAP4Q8WY91 577 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 KAT2AQ92830 837 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 RGMAQ96B86 450 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 MS4A4AQ96JQ5 239 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF354BQ96LW1 612 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 C10orf90Q96M02 699 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ST3GAL5Q9UNP4 418 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 C5orf58C9J3I9 102 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PRR23D1E9PI22 279 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 MID1O15344 667 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PRR23D2P0DMB1 279 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SOAT1P35610 550 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 MC2RQ01718 297 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PIN1Q13526 163 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 CHRNA6Q15825 494 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 DUSP28Q4G0W2 176 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM69AQ5T7M9 428 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 TPRA1Q86W33 373 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 LINC00471Q8N535 108 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 RFKQ969G6 155 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PPCDCQ96CD2 204 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 WFDC6Q9BQY6 131 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 EGLN3Q9H6Z9 239 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ZFYVE1Q9HBF4 777 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC6A20Q9NP91 592 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 EQTNQ9NQ60 294 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 MED11Q9P086 117 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 NTMQ9P121 344 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 EXOGQ9Y2C4 368 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ZFP37Q9Y6Q3 630 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PLXNB3Q9ULL4 1909 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ARPC5O15511 151 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 GATBO75879 557 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 RASGRP1O95267 797 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 F2P00734 622 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 HIST1H2ABP04908 130 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 BCHEP06276 602 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 IFNGR1P15260 489 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 PSMB1P20618 241 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 GSTM3P21266 225 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 CD96P40200 585 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 NSG1P42857 185 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 CDH4P55283 916 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TSC22D1Q15714 1073 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF792Q3KQV3 632 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF528Q3MIS6 628 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF660Q6AZW8 331 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 HIST3H2AQ7L7L0 130 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 IQCHQ86VS3 1027 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TEX47Q8TBZ9 253 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 SLC22A8Q8TCC7 542 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 HIST1H2ACQ93077 130 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 C19orf43Q9BQ61 176 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ARL6Q9H0F7 186 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ZNF768Q9H5H4 540 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 SGK2Q9HBY8 427 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 GPBP1L1Q9HC44 474 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ERVK-19Q9WJR5 959 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 GFYI3L273 518 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 KPNA3O00505 521 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 HYAL3O43820 417 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 AQP8O94778 261 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 UBXN7O94888 489 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 GLAP06280 429 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ERVK-25P63136 954 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 MC1RQ01726 317 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ZC3H14Q6PJT7 736 aaKnown RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TSPAN33Q86UF1 283 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 SMIM4Q8WVI0 70 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 NXPE3Q969Y0 559 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 ELP4Q96EB1 424 aa7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 TREX2Q9BQ50 279 aaPredicted RBP7.52□□□□□ -1.21
HMGXB4-202ENST00000418170 JAM3Q9BX67 310 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms