RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 PPP1R16AQ96I34 528 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 TEX12Q9BXU0 123 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 GSDMCQ9BYG8 508 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 BRD7Q9NPI1 651 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 KCMF1Q9P0J7 381 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 EIF3KQ9UBQ5 218 aaKnown RBP12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 CHST2Q9Y4C5 530 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 PATJQ8NI35 1801 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 A0A1W2PR48 441 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 I3L521 148 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 FAAHO00519 579 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC16A5O15375 505 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 LANCL1O43813 399 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 LAMP2P13473 410 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SNRPBP14678 240 aaKnown RBP12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 CST5P28325 142 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SNRPNP63162 240 aaKnown RBP12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SUZ12Q15022 739 aaKnown RBP12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 LYPD4Q6UWN0 246 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 CPA6Q8N4T0 437 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 BOLLQ8N9W6 283 aaKnown RBP12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 MAP6Q96JE9 813 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 WDR45Q9Y484 360 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 KLK4Q9Y5K2 254 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZNF670-ZNF695F2Z2N8 137 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 HCN1O60741 890 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 CCL5P13501 91 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 KCNJ5P48544 419 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 PGDP52209 483 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 MZT2BQ6NZ67 158 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 KIF18BQ86Y91 864 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 TMC8Q8IU68 726 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 DCUN1D3Q8IWE4 304 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 DEFB119Q8N690 84 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 NANOGP1Q8N7R0 232 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 MYNNQ9NPC7 610 aa12.38□□□□□ -0.43
TNFRSF8-203ENST00000417814 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 E9PI62 339 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 GABRPO00591 440 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 MPZL2O60487 215 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 MT-ND4P03905 459 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 PROS1P07225 676 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 UGT2B10P36537 528 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 MRPL19P49406 292 aaKnown RBP12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ATP12AP54707 1039 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 VSX2P58304 361 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 C1orf61Q13536 156 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ENTPD8Q5MY95 495 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 TMEM99Q8N816 258 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR5T3Q8NGG3 340 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 CNRIP1Q96F85 164 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 BCL7BQ9BQE9 202 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 CPEB1Q9BZB8 566 aaKnown RBP12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ING3Q9NXR8 418 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 REV1Q9UBZ9 1251 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ENOPH1Q9UHY7 261 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 V9GYH0 126 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 SDK2Q58EX2 2172 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 IGLV3-16A0A075B6K0 115 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 CIB4A0PJX0 185 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 PEX12O00623 359 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 MSL3P1P0C860 447 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 HOXB9P17482 250 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 GABRB1P18505 474 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 PTGS2P35354 604 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ACTR1BP42025 376 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ACTR1AP61163 376 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC7A9P82251 487 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 SQSTM1Q13501 440 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 FCN2Q15485 313 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZDHHC20Q5W0Z9 365 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 ENPP7Q6UWV6 458 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 FAM174AQ8TBP5 190 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 CREB3L4Q8TEY5 395 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 PDXPQ96GD0 296 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 AMDHD1Q96NU7 426 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 B3GAT2Q9NPZ5 323 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 SCN5AQ14524 2016 aa12.37□□□□□ -0.43
TNFRSF8-203ENST00000417814 PRR23D1E9PI22 279 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 PLA2G10O15496 165 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 FABP7O15540 132 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 AIFM1O95831 613 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 PRR23D2P0DMB1 279 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 ELK1P19419 428 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 CSNK2A2P19784 350 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TBXA2RP21731 343 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZNF81P51508 661 aa12.36□□□□□ -0.43
TNFRSF8-203ENST00000417814 TAS2R38P59533 333 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms