RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PINK1Q9BXM7 581 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 GLIPR2Q9H4G4 154 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 RNF122Q9H9V4 155 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 MIEF1Q9NQG6 463 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 ELOVL5Q9NYP7 299 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 ZNF226Q9NYT6 803 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 GRID1Q9ULK0 1009 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 ABCG2Q9UNQ0 655 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 PCNX3Q9H6A9 2034 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 ROS1P08922 2347 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 JMJD1CQ15652 2540 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 LINC01387J3KSC0 135 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 SEC14L5O43304 696 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 ARHGEF9O43307 516 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 EMC8O43402 210 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 SMPD2O60906 423 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 SLITRK5O94991 958 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 IL33O95760 270 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 POU2F1P14859 743 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 GUSBP1Q15486 140 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 DECR1Q16698 335 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 GLE1Q53GS7 698 aaKnown RBP13.34□□□□□ -0.27
RPS28-201ENST00000417088 Q5PR19 223 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 LRRC75A-AS1Q8N1F1 130 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 ZNF610Q8N9Z0 462 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 FNDC9Q8TBE3 224 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 PIGTQ969N2 578 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 ELP4Q96EB1 424 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 C1GALT1C1Q96EU7 318 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 MARK4Q96L34 752 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 AMDHD1Q96NU7 426 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 SLC39A3Q9BRY0 314 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 PTGES2Q9H7Z7 377 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 ZNF395Q9H8N7 513 aaPredicted RBP13.34□□□□□ -0.27
RPS28-201ENST00000417088 Q9N2J8 555 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 MID1IP1Q9NPA3 183 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 MYNNQ9NPC7 610 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 DDX18Q9NVP1 670 aaKnown RBP13.34□□□□□ -0.27
RPS28-201ENST00000417088 FAM120CQ9NX05 1096 aaKnown RBP13.34□□□□□ -0.27
RPS28-201ENST00000417088 ZNF175Q9Y473 711 aa13.34□□□□□ -0.27
RPS28-201ENST00000417088 TLN2Q9Y4G6 2542 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 H3BML4 177 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 C16orf97H3BN30 126 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 CD8BP10966 210 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 PYGBP11216 843 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 NTSP30990 170 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 PON3Q15166 354 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 ACKR1Q16570 336 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 GLYR1Q49A26 553 aaPredicted RBP13.33□□□□□ -0.28
RPS28-201ENST00000417088 APOOLQ6UXV4 268 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 C22orf34Q6ZV56 151 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 ZNF550Q7Z398 422 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 CIARTQ8N365 385 aaPredicted RBP13.33□□□□□ -0.28
RPS28-201ENST00000417088 CCNYL1Q8N7R7 359 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 ACMSDQ8TDX5 336 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 ARSGQ96EG1 525 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 PIGQQ9BRB3 760 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 LMF2Q9BU23 707 aaKnown RBP13.33□□□□□ -0.28
RPS28-201ENST00000417088 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
RPS28-201ENST00000417088 POLR3HQ9Y535 204 aaPredicted RBP13.33□□□□□ -0.28
RPS28-201ENST00000417088 CSPG4Q6UVK1 2322 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 IGLV3-32A0A0A0MS00 114 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 RIPK2O43353 540 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 AQP8O94778 261 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 UTS2O95399 124 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 LY6G6DO95868 133 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 IGKV1D-16P01601 117 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 HEXAP06865 529 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 GSTA1P08263 222 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 LOXP28300 417 aaPredicted RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 RFX3P48380 749 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 KCNJ5P48544 419 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 CLK3P49761 638 aaKnown RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 OCRLQ01968 901 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 FGFBP1Q14512 234 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 ZNHIT3Q15649 155 aaPredicted RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 IMPG1Q17R60 797 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 TMEM44Q2T9K0 475 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 TRMT10CQ7L0Y3 403 aaKnown RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 METTL25Q8N6Q8 603 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 FAM76AQ8TAV0 307 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 MZB1Q8WU39 189 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 ZC3HAV1LQ96H79 300 aaKnown RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 COX4I2Q96KJ9 171 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 UBTD1Q9HAC8 227 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 PROCRQ9UNN8 238 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 WBP11Q9Y2W2 641 aaKnown RBP13.32□□□□□ -0.28
RPS28-201ENST00000417088 AP4B1Q9Y6B7 739 aa13.32□□□□□ -0.28
RPS28-201ENST00000417088 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 FAM171A2A8MVW0 826 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 SHISA8B8ZZ34 492 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 G3V2L1 256 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 H7C1Q1 480 aa13.31□□□□□ -0.28
RPS28-201ENST00000417088 GMFGO60234 142 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms