RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 RFLNAQ6ZTI6 216 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZER1Q7Z7L7 766 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 GPR26Q8NDV2 337 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 ACOT12Q8WYK0 555 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 GCDHQ92947 438 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 CHFRQ96EP1 664 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 IGSF21Q96ID5 467 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC38A3Q99624 504 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 C20orf85Q9H1P6 137 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 POLMQ9NP87 494 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 TEX10Q9NXF1 929 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF69Q9UC07 566 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 KCND3Q9UK17 655 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 FRMPD3Q5JV73 1810 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 GREB1Q4ZG55 1949 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 PATJQ8NI35 1801 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 REV3LO60673 3130 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 TRAV20A0A0B4J274 112 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 F11P03951 625 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARAFP10398 606 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 EEF1A2Q05639 463 aaKnown RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 LGALS3BPQ08380 585 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 NAE1Q13564 534 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 HTR4Q13639 388 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 HBMQ6B0K9 141 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 PYHIN1Q6K0P9 492 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 MMP21Q8N119 569 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 KLHL36Q8N4N3 616 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 RELL2Q8NC24 303 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 FBXO15Q8NCQ5 510 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 FCRL4Q96PJ5 515 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 TMEM38AQ9H6F2 299 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 CA10Q9NS85 328 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 NFKBIL1Q9UBC1 381 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 MBD1Q9UIS9 605 aaPredicted RBP13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 PLCL2Q9UPR0 1127 aa13.81□□□□□ -0.2
NCKIPSD-204ENST00000416649 FXYD6-FXYD2A0A087WZ82 144 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 TUBAL3A6NHL2 446 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC9B1P1A6NJY1 282 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 AIPO00170 330 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 RP2O75695 350 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SPDEFO95238 335 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PTNP21246 168 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 FNTBP49356 437 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 GAS1P54826 345 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF177Q13360 481 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PDSS1Q5T2R2 415 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 MPP7Q5T2T1 576 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 HIST2H2AA3Q6FI13 130 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 MEIOBQ8N635 442 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 OR56B4Q8NH76 319 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 YIPF5Q969M3 257 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC22A12Q96S37 553 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 DMRTA2Q96SC8 542 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 FNDC11Q9BVV2 318 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 FXYD6Q9H0Q3 95 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 REEP4Q9H6H4 257 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ELAC1Q9H777 363 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PLXNA4Q9HCM2 1894 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 A0A1W2PRB8 838 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 H0YC42 278 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 EFCAB14O75071 495 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZNF8P17098 575 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC6A12P48065 614 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PCBP3P57721 371 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PFN3P60673 137 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ARL9Q6T311 187 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 BTN2A1Q7KYR7 527 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PDZD9Q8IXQ8 264 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ZDHHC1Q8WTX9 485 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 TMEM19Q96HH6 336 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 AUNIPQ9H7T9 357 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ISG20L2Q9H9L3 353 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SEC14L3Q9UDX4 400 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 MRTO4Q9UKD2 239 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SDC3O75056 442 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PEX14O75381 377 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 TGFB1P01137 390 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 ADRB1P08588 477 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 FGF2P09038 288 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 PSMA3P25788 255 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 TIA1P31483 386 aaKnown RBP eCLIP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC25A35Q3KQZ1 300 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 NXPE1Q8N323 547 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 WDR20Q8TBZ3 569 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC38A5Q8WUX1 472 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 VWCEQ96DN2 955 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 SLC12A9Q9BXP2 914 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 CWH43Q9H720 699 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 CHST2Q9Y4C5 530 aa13.8□□□□□ -0.2
NCKIPSD-204ENST00000416649 COCHO43405 550 aa13.79□□□□□ -0.2
NCKIPSD-204ENST00000416649 EGFP01133 1207 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms